CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012886
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial 
Protein Synonyms/Alias
 Phosphatidylglycerophosphate synthase 1; PGP synthase 1 
Gene Name
 PGS1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
152LEKSLQAKFPSNLKVubiquitination[1, 2, 3]
553KMVTPLIKNFF****ubiquitination[2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin (By similarity). 
Sequence Annotation
 DOMAIN 215 241 PLD phosphodiesterase 1.
 DOMAIN 460 493 PLD phosphodiesterase 2.
 NP_BIND 124 131 ATP (Potential).
 ACT_SITE 220 220 Potential.
 ACT_SITE 222 222 Potential.
 ACT_SITE 227 227 Potential.  
Keyword
 Alternative splicing; ATP-binding; Complete proteome; Lipid biosynthesis; Lipid metabolism; Mitochondrion; Nucleotide-binding; Phospholipid biosynthesis; Phospholipid metabolism; Reference proteome; Repeat; Transferase; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 556 AA 
Protein Sequence
MAVAAAAAAG PVFWRRLLGL LPGRPGLAAL LGRLSDRLGR NRDRQRRRSP WLLLAPLLSP 60
AVPQVTSPPC CLCPEGVHRF QWIRNLVPEF GVSSSHVRVL SSPAEFFELM KGQIRVAKRR 120
VVMASLYLGT GPLEQELVDC LESTLEKSLQ AKFPSNLKVS ILLDFTRGSR GRKNSRTMLL 180
PLLRRFPEQV RVSLFHTPHL RGLLRLLIPE RFNETIGLQH IKVYLFDNSV ILSGANLSDS 240
YFTNRQDRYV FLQDCAEIAD FFTELVDAVG DVSLQLQGDD TVQVVDGMVH PYKGDRAEYC 300
KAANKRVMDV INSARTRQQM LHAQTFHSNS LLTQEDAAAA GDRRPAPDTW IYPLIQMKPF 360
EIQIDEIVTE TLLTEAERGA KVYLTTGYFN LTQAYMDLVL GTRAEYQILL ASPEVNGFFG 420
AKGVAGAIPA AYVHIERQFF SEVCSLGQQE RVQLQEYWRR GWTFHAKGLW LYLAGSSLPC 480
LTLIGSPNFG YRSVHRDLEA QIAIVTENQA LQQQLHQEQE QLYLRSGVVS SATFEQPSRQ 540
VKLWVKMVTP LIKNFF 556 
Gene Ontology
 GO:0005783; C:endoplasmic reticulum; IDA:LIFEdb.
 GO:0005743; C:mitochondrial inner membrane; TAS:BHF-UCL.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0005509; F:calcium ion binding; ISS:BHF-UCL.
 GO:0008444; F:CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; ISS:BHF-UCL.
 GO:0032049; P:cardiolipin biosynthetic process; ISS:BHF-UCL.
 GO:0046339; P:diacylglycerol metabolic process; ISS:BHF-UCL.
 GO:0044281; P:small molecule metabolic process; TAS:Reactome. 
Interpro
 IPR025202; PLD-like_dom.
 IPR016270; PLipase-D_PtdSer-synthase-type.
 IPR001736; PLipase_D/transphosphatidylase. 
Pfam
 PF13091; PLDc_2 
SMART
  
PROSITE
 PS50035; PLD 
PRINTS