CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-040943
UniProt Accession
F8WDA0_HUMAN
;
F8WDA0
Genbank Protein ID
AC023508
;
AC109992
Genbank Nucleotide ID
Protein Name
5'-3' exoribonuclease 1
Protein Synonyms/Alias
Gene Name
XRN1
Gene Synonyms/Alias
Created Date
July 27, 2013
Organism
Homo sapiens (Human)
NCBI Taxa ID
9606
Lysine Modification
Position
Peptide
Type
References
79
FRIIKPR
K
VFFMAVD
ubiquitination
[1]
Reference
[1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [
PMID: 21890473
]
Functional Description
Sequence Annotation
Keyword
Complete proteome; Reference proteome.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
107 AA
Protein Sequence
MGVPKFYRWI SERYPCLSEV VKEHQIPEFD NLYLDMNGII HQCSHPNDDD VHFRISDDKI 60
FTDIFHYLEV LFRIIKPRKV FFMAVDGVAP RAKMNQQRGR RFRLCLD 107
Gene Ontology
GO:0005622
; C:intracellular; IEA:InterPro.
GO:0004527
; F:exonuclease activity; IEA:InterPro.
GO:0003676
; F:nucleic acid binding; IEA:InterPro.
Interpro
IPR027073
; 5_3_exoribonuclease.
IPR004859
; Put_53exo.
Pfam
PF03159
; XRN_N
SMART
PROSITE
PRINTS