CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013335
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pre-mRNA-splicing factor SYF2 
Protein Synonyms/Alias
  
Gene Name
 Syf2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
142HRLTKQIKPDMESYEacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 May be involved in pre-mRNA splicing (By similarity). 
Sequence Annotation
 MOD_RES 2 2 N-acetylalanine (By similarity).  
Keyword
 Acetylation; Coiled coil; Complete proteome; mRNA processing; mRNA splicing; Nucleus; Reference proteome; Spliceosome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 242 AA 
Protein Sequence
MAAVTEVVVP ADGAEARPLA AEELAAQKRE QRLRKFRELH LKRNEARKLN HQEVVEEDKR 60
LKLPANWEAK KARLEWELQE EEKKKECAAR GEDYEKVKLL EISAEDAERW ERRKKKKNPD 120
LGFSDYAAAQ LRQYHRLTKQ IKPDMESYER QREKHGEDFF PTSNSLLHGT HVPSSEEIDR 180
MVLDLEKQIE KRDKYSRRRP YNDDADIDYI NERNAKFNKK AERFYGKYTA EIKQNLERGT 240
AV 242 
Gene Ontology
 GO:0071013; C:catalytic step 2 spliceosome; IEA:Compara.
 GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
 GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. 
Interpro
 IPR013260; mRNA_splic_SYF2. 
Pfam
 PF08231; SYF2 
SMART
  
PROSITE
  
PRINTS