CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039036
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 RNA polymerase II-associated protein 3 
Protein Synonyms/Alias
  
Gene Name
 Rpap3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
142VLKEKGNKYFKQGKYacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Repeat; TPR repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 660 AA 
Protein Sequence
MTSTSKAVEL QLQVKHNAEE LQDFMRDLEH WEKTMRQKDL ELRRQSGVPE ENLPPIRNGS 60
FRKKKKRKTK DSSKKTKEEN TKNRIKSFDY DAWAKLDVDS ILDELDKEDS THDSVSQESE 120
SDEDGVRVDS QKALVLKEKG NKYFKQGKYD EAIECYTKGM DADPYNPVLP TNRASAYFRL 180
KKFAVAESDC NLAIALSRSY TKAYARRGAA RFALQKLEDA RKDYVKVLEL EPDNFEATNE 240
LRKIDQALTS KENSHPKDIA AVIKPAEGER KANEDQRGRQ KAIAEKDLLG SFLLPCGSQQ 300
WIQVVRLGNK HFYPLDHLSS PHSIFYELHV VQYEEAERDC TQAILLDGSY SKAFARRGTA 360
RTFLGKINEA KQDFETVLLL EPGNKQAVTE LSRIKKELIE KGRWDDVFLD STQRHNVVKP 420
VDSPHRGSPK ALKKVFIEET GNLIESVDAP ESSATVPESD RAAVAVDTGR KKDFSQGDSV 480
SSGETPRAKV LKIEAVGDSS APQTERDAGT GLGQSVSEKT SVRVAQTPGQ LAAVVLPPVP 540
ANSFQLESDF RQLRSSPEML YQYVKKIEPS LYPKLFQKNL DPDVFNQIIK ILHDFYVERE 600
KPALIFEVLE RLSQLRRFDM AVMFMSGTER ELTKVLFNHL EKSELKEDSV EELKKRYGGG 660 
Gene Ontology
  
Interpro
 IPR025986; RPAP3-like_C.
 IPR001440; TPR-1.
 IPR013026; TPR-contain_dom.
 IPR011990; TPR-like_helical.
 IPR019734; TPR_repeat. 
Pfam
 PF13877; RPAP3_C
 PF00515; TPR_1 
SMART
 SM00028; TPR 
PROSITE
 PS50005; TPR
 PS50293; TPR_REGION 
PRINTS