CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-044662
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Nucleoporin NDC1 
Protein Synonyms/Alias
  
Gene Name
 Tmem48 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
429PSVPPLVKTSLFSPKubiquitination[1]
436KTSLFSPKLSTPNVSubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 541 AA 
Protein Sequence
MATAASGPCA GGSPRDILWR VLGWRIVTSI VWSVVLLPVC ITAFIVLSSI NLFHPIQWLS 60
DSCNDFYSSQ VIFHLLLLAV VIIIISIFNV EFYTVVPSIS GSRLALIARI LHPQQLTHSF 120
IHAAMGMAVA WCAAIMTKGQ YSSLVVPCTG TESLDSPAAQ TCLNEYHLFF LLSGAFMGYS 180
YSLLYFINNM NYLPFPIIQQ YKFLRFRRSL LLLVKHSCVE SLFMVRNFCI VYYFFGHIPK 240
AWISTALDLH TDEQAHRPLD TIGGLLNVSL LYHVWLCGVF LLVTWYSSWI LFKIYATEAH 300
VFPVQPPFAE ASDECLPKVL NSNPPRIVKY LALQDLMLLS QYSPSRRQEV FSLSQPGGHP 360
HNWTAISREC LNLLNDMTQK LVLYQEAAAT NGRMYSSYSV EPKKLSSAEE TAFQTPKPSQ 420
TPSVPPLVKT SLFSPKLSTP NVSSPFGTPF GSSVVNRMAG ILDVNPFSGS PQSPQLIRRG 480
PRLWTHTSDQ QVSAISNPSP CASVTAEAPR GLHSGCFFRC PNAYLGFRRS VSLSSSVIYR 540
R 541 
Gene Ontology
  
Interpro
 IPR019049; Nucleoporin_prot_Ndc1/Nup. 
Pfam
 PF09531; Ndc1_Nup 
SMART
  
PROSITE
  
PRINTS