CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042621
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Crossover junction endonuclease EME1 
Protein Synonyms/Alias
  
Gene Name
 EME1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
82AALVTRMKAQRPEECubiquitination[1]
152LDSTMKGKETLQGFVubiquitination[1, 2]
165FVTDITAKTAGKALSubiquitination[1]
169ITAKTAGKALSLVIVubiquitination[1, 2]
253DFTCAFTKAVAEAPFubiquitination[1]
262VAEAPFKKLRDETTFubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 337 AA 
Protein Sequence
XLILDPCCQL PAYLSTCPGQ SSSLAVTKTN SDILPPQKKT KPSQKVQGRG SHGCRQQRQA 60
RQKESTLRRQ ERKNAALVTR MKAQRPEECL KHIIVVLDPV LLQMEGGGQL LGALQTMECR 120
CVIEAQAVPC SVTWRRRAGP SEGSLDSTMK GKETLQGFVT DITAKTAGKA LSLVIVDQEK 180
CFSAQNPPRR GKQGANKQTK KQQQRQPEAS IGSMVSRVDA EEALVDLQLH TEAQAQIVQS 240
WKELADFTCA FTKAVAEAPF KKLRDETTFS FCLESDWAGG VKVDLAGRGL ALVWRRQIQQ 300
LNRVSLEMAS AVVNAYPSPQ LLVQAYQQCF SDKERQN 337 
Gene Ontology
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0004518; F:nuclease activity; IEA:InterPro.
 GO:0006259; P:DNA metabolic process; IEA:InterPro.
 GO:0090305; P:nucleic acid phosphodiester bond hydrolysis; IEA:GOC. 
Interpro
 IPR006166; ERCC4_domain. 
Pfam
 PF02732; ERCC4 
SMART
 SM00891; ERCC4 
PROSITE
  
PRINTS