CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-034174
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Pyridoxal-dependent decarboxylase domain-containing protein 1 
Protein Synonyms/Alias
  
Gene Name
 Pdxdc1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
18PTLAEMGKNLKEAMRubiquitination[1]
312TSNKPADKLRALPLWubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Lyase; Pyridoxal phosphate; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 380 AA 
Protein Sequence
MDASLEKIAD PTLAEMGKNL KEAMRMLEKS PRRTEEENGK KPVSEDIPGP LQGSGQDMVS 60
ILQLVQNLMH GDEDEEPQST RIQNIGEQGH MALLGHSLGA YISTLDKEKL RKLTTRILSD 120
TTLWLRRIFR YENGCAYFHE EEREGLAKIC RLAIHSRYED FVVDGFNVLY NKKPVIYLSA 180
AARPGLGQYL CNQDVAFLEK LIKDDVERGR LPLLLVANAG TAAVGHTDKI GRLKELCEQY 240
GIWLHVEGVN LATLALGYVS SSVLAATKCD SMTLTPGLWL GLPAVPAVTL YKHDDPALTL 300
VAGLTSNKPA DKLRALPLWL SLQYLGLDGI VERIKHACHL SQRLQESLKK VDHIKILVED 360
ELSSPVVVFR FFQELPASGR 380 
Gene Ontology
 GO:0016831; F:carboxy-lyase activity; IEA:InterPro.
 GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
 GO:0019752; P:carboxylic acid metabolic process; IEA:InterPro. 
Interpro
 IPR002129; PyrdxlP-dep_de-COase.
 IPR015424; PyrdxlP-dep_Trfase.
 IPR015421; PyrdxlP-dep_Trfase_major_sub1.
 IPR015422; PyrdxlP-dep_Trfase_major_sub2. 
Pfam
 PF00282; Pyridoxal_deC 
SMART
  
PROSITE
  
PRINTS