CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021809
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Partitioning defective 6 homolog beta 
Protein Synonyms/Alias
 PAR-6 beta; PAR-6B 
Gene Name
 Pard6b 
Gene Synonyms/Alias
 Par6b 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
95LLRIFIQKKEEADYSacetylation[1]
188VTPHGLEKVPGIFISubiquitination[2]
Reference
 [1] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [2] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Adapter protein involved in asymmetrical cell division and cell polarization processes. Probably involved in formation of epithelial tight junctions. Association with PARD3 may prevent the interaction of PARD3 with F11R/JAM1, thereby preventing tight junction assembly. The PARD6-PARD3 complex links GTP-bound Rho small GTPases to atypical protein kinase C proteins. 
Sequence Annotation
 DOMAIN 16 96 OPR.
 DOMAIN 133 150 Pseudo-CRIB.
 DOMAIN 157 250 PDZ.
 REGION 126 253 Interaction with PARD3 and CDC42.
 MOD_RES 11 11 Phosphoserine (By similarity).  
Keyword
 3D-structure; Alternative splicing; Cell cycle; Cell division; Cell junction; Cell membrane; Complete proteome; Cytoplasm; Membrane; Phosphoprotein; Reference proteome; Tight junction. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 371 AA 
Protein Sequence
MNRGHRHGAS SGCLGTMEVK SKFGAEFRRF SLERSKPGKF EEFYGLLQHV HKIPNVDVLV 60
GYADIHGDLL PINNDDNYHK AVSTANPLLR IFIQKKEEAD YSAFGTDTLI RKKNMLSNVL 120
RPDNHRKKPH IVISMPQDFR PVSSIIDVDI LPETHRRVRL YKYGTEKPLG FYIRDGSSVR 180
VTPHGLEKVP GIFISRLVPG GLAQSTGLLA VNDEVLEVNG IEVSGKSLDQ VTDMMIANSR 240
NLIITVRPAN QRNNVVRNSR TSGSSSQSTD NSLLGFPQQV EASFEPEDQD SDEDDIIIED 300
SGEPQQIPKA TPAQSLESLT QIELSFESGQ NGFSPPQDTS LVPVPGSLDT ELESRAPDQK 360
LLEEDGTIIT L 371 
Gene Ontology
 GO:0045177; C:apical part of cell; IDA:MGI.
 GO:0005938; C:cell cortex; IDA:MGI.
 GO:0005634; C:nucleus; IDA:MGI.
 GO:0005886; C:plasma membrane; ISS:UniProtKB.
 GO:0043234; C:protein complex; IEA:Compara.
 GO:0005923; C:tight junction; ISS:UniProtKB.
 GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
 GO:0051301; P:cell division; IEA:UniProtKB-KW.
 GO:0006461; P:protein complex assembly; ISS:UniProtKB. 
Interpro
 IPR000270; OPR_PB1.
 IPR001478; PDZ. 
Pfam
 PF00564; PB1
 PF00595; PDZ 
SMART
 SM00666; PB1
 SM00228; PDZ 
PROSITE
 PS50106; PDZ 
PRINTS