CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042601
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 60 kDa SS-A/Ro ribonucleoprotein 
Protein Synonyms/Alias
  
Gene Name
 TROVE2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
81KDLKESMKCGMWGRAubiquitination[1, 2]
121QRNGWSHKDLLRLSHubiquitination[2]
187ALSVETEKLLKYLEAacetylation[3]
187ALSVETEKLLKYLEAubiquitination[4, 5]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [4] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [5] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 194 AA 
Protein Sequence
ALIRLIEDGR GCEVIQEIKS FSQEGRTTKQ EPMLFALAIC SQCSDISTKQ AAFKAVSEVC 60
RIPTHLFTFI QFKKDLKESM KCGMWGRALR KAIADWYNEK GGMALALAVT KYKQRNGWSH 120
KDLLRLSHLK PSSEVKLEKT ATQKGGFTFQ FCGLKPRLAI VTKYITKGWK EVHELYKEKA 180
LSVETEKLLK YLEA 194 
Gene Ontology
 GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:InterPro. 
Interpro
 IPR008858; TROVE. 
Pfam
 PF05731; TROVE 
SMART
  
PROSITE
 PS50988; TROVE 
PRINTS