CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007520
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 General transcription factor IIF subunit 2 
Protein Synonyms/Alias
 ATP-dependent helicase TfIIF-beta; Transcription initiation factor IIF subunit beta; TFIIF-beta 
Gene Name
 TfIIFbeta 
Gene Synonyms/Alias
 TFIIF30; CG6538 
Created Date
 July 27, 2013 
Organism
 Drosophila melanogaster (Fruit fly) 
NCBI Taxa ID
 7227 
Lysine Modification
Position
Peptide
Type
References
37VPKYIAQKWEKAPTNacetylation[1]
171DKIVQNFKPVKDHAHacetylation[1]
Reference
 [1] Proteome-wide mapping of the Drosophila acetylome demonstrates a high degree of conservation of lysine acetylation.
 Weinert BT, Wagner SA, Horn H, Henriksen P, Liu WR, Olsen JV, Jensen LJ, Choudhary C.
 Sci Signal. 2011 Jul 26;4(183):ra48. [PMID: 21791702
Functional Description
 TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA- helicase activity (By similarity). 
Sequence Annotation
 NP_BIND 43 50 ATP (By similarity).  
Keyword
 ATP-binding; Complete proteome; DNA-binding; Helicase; Hydrolase; Nucleotide-binding; Nucleus; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 277 AA 
Protein Sequence
MSKEDKEKTQ IIDKDLDLSN AGRGVWLVKV PKYIAQKWEK APTNMDVGKL RINKTPGQKA 60
QVSLSLTPAV LALDPEEKIP TEHILDVSQV TKQTLGVFSH MAPSDGKENS TTSAAQPDNE 120
KLYMEGRIVQ KLECRPIADN CYMKLKLESI RKASEPQRRV QPIDKIVQNF KPVKDHAHNI 180
EYRERKKAEG KKARDDKNAV MDMLFHAFEK HQYYNIKDLV KITNQPISYL KEILKDVCDY 240
NMKNPHKNMW ELKKEYRHYK TEEKKEEEHK SGSSDSE 277 
Gene Ontology
 GO:0005674; C:transcription factor TFIIF complex; IDA:FlyBase.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:FlyBase.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.
 GO:0060261; P:positive regulation of transcription initiation from RNA polymerase II promoter; IDA:FlyBase.
 GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:FlyBase. 
Interpro
 IPR016640; TFIIF-beta_subgr.
 IPR003196; TFIIF_beta.
 IPR011039; TFIIF_interaction.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF02270; TFIIF_beta 
SMART
  
PROSITE
  
PRINTS