CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-019795
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Homeobox protein Nkx-3.1 
Protein Synonyms/Alias
 Homeobox protein NK-3 homolog A 
Gene Name
 NKX3-1 
Gene Synonyms/Alias
 NKX3.1; NKX3A 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
162AHLAKNLKLTETQVKubiquitination[1]
182RRYKTKRKQLSSELGubiquitination[1, 2]
Reference
 [1] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Transcription factor, which binds preferentially the consensus sequence 5'-TAAGT[AG]-3' and can behave as a transcriptional repressor. Plays an important role in normal prostate development, regulating proliferation of glandular epithelium and in the formation of ducts in prostate. Acts as a tumor suppressor controlling prostate carcinogenesis, as shown by the ability to inhibit proliferation and invasion activities of PC-3 prostate cancer cells. 
Sequence Annotation
 DNA_BIND 124 183 Homeobox.  
Keyword
 3D-structure; Alternative splicing; Complete proteome; DNA-binding; Homeobox; Nucleus; Polymorphism; Reference proteome; Repressor; Transcription; Transcription regulation; Tumor suppressor; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 234 AA 
Protein Sequence
MLRVPEPRPG EAKAEGAAPP TPSKPLTSFL IQDILRDGAQ RQGGRTSSQR QRDPEPEPEP 60
EPEGGRSRAG AQNDQLSTGP RAAPEEAETL AETEPERHLG SYLLDSENTS GALPRLPQTP 120
KQPQKRSRAA FSHTQVIELE RKFSHQKYLS APERAHLAKN LKLTETQVKI WFQNRRYKTK 180
RKQLSSELGD LEKHSSLPAL KEEAFSRASL VSVYNSYPYY PYLYCVGSWS PAFW 234 
Gene Ontology
 GO:0005634; C:nucleus; IDA:UniProtKB.
 GO:0004882; F:androgen receptor activity; IDA:UniProtKB.
 GO:0001047; F:core promoter binding; IDA:UniProtKB.
 GO:0030284; F:estrogen receptor activity; IDA:UniProtKB.
 GO:0030331; F:estrogen receptor binding; IDA:UniProtKB.
 GO:0000988; F:protein binding transcription factor activity; IDA:UniProtKB.
 GO:0030295; F:protein kinase activator activity; IDA:UniProtKB.
 GO:0043621; F:protein self-association; IDA:UniProtKB.
 GO:0000983; F:RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity; IEA:Compara.
 GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IDA:BHF-UCL.
 GO:0006919; P:activation of cysteine-type endopeptidase activity involved in apoptotic process; IDA:UniProtKB.
 GO:0060442; P:branching involved in prostate gland morphogenesis; ISS:UniProtKB.
 GO:0048754; P:branching morphogenesis of an epithelial tube; ISS:UniProtKB.
 GO:0035690; P:cellular response to drug; IEP:UniProtKB.
 GO:0071456; P:cellular response to hypoxia; IDA:UniProtKB.
 GO:0071347; P:cellular response to interleukin-1; IEP:UniProtKB.
 GO:0071356; P:cellular response to tumor necrosis factor; IEP:UniProtKB.
 GO:0035907; P:dorsal aorta development; IEA:Compara.
 GO:0060664; P:epithelial cell proliferation involved in salivary gland morphogenesis; ISS:UniProtKB.
 GO:0007507; P:heart development; IEA:Compara.
 GO:0008584; P:male gonad development; IEA:Compara.
 GO:0001656; P:metanephros development; IEA:Compara.
 GO:0071850; P:mitotic cell cycle arrest; IDA:UniProtKB.
 GO:0060770; P:negative regulation of epithelial cell proliferation involved in prostate gland development; ISS:UniProtKB.
 GO:0071899; P:negative regulation of estrogen receptor binding; IDA:UniProtKB.
 GO:0043569; P:negative regulation of insulin-like growth factor receptor signaling pathway; ISS:UniProtKB.
 GO:0045930; P:negative regulation of mitotic cell cycle; IDA:UniProtKB.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.
 GO:0060037; P:pharyngeal system development; IEA:Compara.
 GO:2000836; P:positive regulation of androgen secretion; IDA:UniProtKB.
 GO:0010942; P:positive regulation of cell death; IDA:UniProtKB.
 GO:0051781; P:positive regulation of cell division; IMP:BHF-UCL.
 GO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB.
 GO:2001244; P:positive regulation of intrinsic apoptotic signaling pathway; IDA:UniProtKB.
 GO:0045931; P:positive regulation of mitotic cell cycle; IMP:BHF-UCL.
 GO:0014068; P:positive regulation of phosphatidylinositol 3-kinase cascade; IDA:UniProtKB.
 GO:2001022; P:positive regulation of response to DNA damage stimulus; IDA:UniProtKB.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.
 GO:0043491; P:protein kinase B signaling cascade; IMP:UniProtKB.
 GO:0033574; P:response to testosterone stimulus; ISS:UniProtKB.
 GO:0001756; P:somitogenesis; IEA:Compara. 
Interpro
 IPR017970; Homeobox_CS.
 IPR020479; Homeobox_metazoa.
 IPR001356; Homeodomain.
 IPR009057; Homeodomain-like. 
Pfam
 PF00046; Homeobox 
SMART
 SM00389; HOX 
PROSITE
 PS00027; HOMEOBOX_1
 PS50071; HOMEOBOX_2 
PRINTS
 PR00024; HOMEOBOX.