CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011493
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribosome biogenesis protein TSR1 
Protein Synonyms/Alias
 20S rRNA accumulation protein 1 
Gene Name
 TSR1 
Gene Synonyms/Alias
 YDL060W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
641NSPNNVHKYERFLHPacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Required for 40S ribosomal subunit synthesis. Required for normal export of the pre-40S particles from the nucleus to the cytoplasm. Its subcellular location and association with pre-40S subunitshifts from mixed cytoplasm/nucleus to all nuclear in RPS19 disruptions, suggesting it acts after the ribosomal protein. 
Sequence Annotation
  
Keyword
 Complete proteome; Cytoplasm; Nucleus; Reference proteome; Ribosome biogenesis. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 788 AA 
Protein Sequence
MAGHSHRSSL KNGHKSYKSK HASKGALKRL YKGKVEKEPV GTGKPDKQVS KLQRKNKAKQ 60
LRAQRILDSI ENRKLFEGKN GAAKIITIVP LVNDLDPLDI LYKLLKCADD EGIMVQEVDS 120
KRIFNVHIKK FKSNLKIIIP DMTNFLNILD CAKVADFVVF GLSGVQEVDE EFGEQIIRAL 180
ELQGIASYIG VISNLSAVHE KEKFQLDVKQ SLESYFKHFF PSEERVYNLE KNSDALNVLR 240
TLCQRLPRSI NWRDNRGYVV ADFVDFVETS PDSGDLVIEG TVRGIGFNAN RLVHIPDFGD 300
FQLNKIEKIS ESSQKRKIIK EKATDSLSLE LDLQTVFESN MNRDTLDEYA PEGTEDWSDY 360
DEDFEYDGLT TARYDDHGFL PGREQTSKKA AVPKGTSDYQ AKWYLDDVID ANEEEEAEQT 420
NGKDETMMEI DDEMMVEQDN EEVAGDEEYD IEDNEGFEEL SPEEEERQLR EFRDMEKEDR 480
EFPDEIELEP SESAIERLKR YRGLKNLYNC DWQVDEKDPS SPAEWKRLLR IGNYKNTKNR 540
IIKETKNEAQ AIAGDRIRMF IRFPKFLLEK IQDPKQLLFA VYGLLLHEHK NAVVNFSLQR 600
WEQYDKPVPS QEPIVVQYGV RRYTIQPLFS QGSNSPNNVH KYERFLHPDT VSVATCIAPV 660
DFTQSPAIFF KPSPTDAKNI ELIGHGTFLN ADHSRILAKR AILTGHPFRF HKTVVTVRYM 720
FFRPEDVEWF KSIPLFTKSG RSGFIKESLG THGYFKATFD GKLSAQDVVA MSLYKRMWPM 780
PSLPWNGM 788 
Gene Ontology
 GO:0030686; C:90S preribosome; IDA:SGD.
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0005730; C:nucleolus; IDA:SGD.
 GO:0043021; F:ribonucleoprotein complex binding; IDA:SGD.
 GO:0006364; P:rRNA processing; IMP:SGD. 
Interpro
 IPR012948; AARP2CN.
 IPR007034; BMS1_TSR1_C. 
Pfam
 PF08142; AARP2CN
 PF04950; DUF663 
SMART
 SM00785; AARP2CN 
PROSITE
  
PRINTS