CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016891
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 PDZ and LIM domain protein 5 
Protein Synonyms/Alias
 Enigma homolog; Enigma-like PDZ and LIM domains protein 
Gene Name
 Pdlim5 
Gene Synonyms/Alias
 Enh 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
89QRASAAAKSEPVSVQubiquitination[1]
105GEPKEVVKPVPITSPacetylation[2, 3]
350LRSAAAFKPVGSTSVacetylation[3, 4]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [3] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [4] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441
Functional Description
 May play an important role in the heart development by scaffolding PKC to the Z-disk region. Isoform 2 and isoform 3 may negatively modulate the scaffolding activity of isoform 1. May play a role in the regulation of cardiomyocyte expansion. Overexpression promotes the development of heart hypertrophy. Contributes to the regulation of dendritic spine morphogenesis in neurons. May restrain postsynaptic growth of excitatory synapses (By similarity). 
Sequence Annotation
 DOMAIN 2 85 PDZ.
 DOMAIN 413 472 LIM zinc-binding 1.
 DOMAIN 472 531 LIM zinc-binding 2.
 DOMAIN 531 591 LIM zinc-binding 3.
 MOD_RES 2 2 N-acetylserine (By similarity).
 MOD_RES 111 111 Phosphoserine (By similarity).
 MOD_RES 137 137 Phosphoserine (By similarity).
 MOD_RES 228 228 Phosphoserine.
 MOD_RES 313 313 Phosphoserine (By similarity).
 MOD_RES 335 335 Phosphoserine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Cell junction; Cell membrane; Complete proteome; Cytoplasm; LIM domain; Membrane; Metal-binding; Phosphoprotein; Postsynaptic cell membrane; Reference proteome; Repeat; Synapse; Synaptosome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 591 AA 
Protein Sequence
MSNYSVSLVG PAPWGFRLQG GKDFNMPLTI SSLKDGGKAS QAHVRIGDVV LSIDGISAQG 60
MTHLEAQNKI KACTGSLNMT LQRASAAAKS EPVSVQKGEP KEVVKPVPIT SPAVSKVTST 120
TNMAYNKAPR PFGSVSSPKV TSIPSPSSAF TPAHAATSSH ASPTPVAAAT PLHLSASGLH 180
VSANLSADQC SSPPNTGKPA VNVPRQPTVT SVCSESAQEL AEGQRRGSQG DIKQQNGPPR 240
KHIVERNTEF YHIPTHSDAS KKRLIEDTED WRPRTGTTQS RSFRILAQIT GTEHLTESEN 300
DNTKKANSTQ EPSQQPASSG ASPLSASEGP ESPGSSRPSV AGLRSAAAFK PVGSTSVKSP 360
SWQRPNQAAP STGRISNNAR SSGTGASVGP PQPSDQDTLV QRAEHIPAGK RTPMCAHCNQ 420
VIRGPFLVAL GKSWHPEEFN CAHCKNTMAY IGFVEEKGAL YCELCYEKFF APECGRCQRK 480
ILGEVINALK QTWHVSCFVC VACGKPIRNN VFHLEDGEPY CETDYYALFG TICRGCEFPI 540
EAGDMFLEAL GYTWHDTCFV CSVCCESLEG QTFFSKKDKP LCKKHAHSVN F 591 
Gene Ontology
 GO:0030054; C:cell junction; IEA:UniProtKB-KW.
 GO:0005829; C:cytosol; ISS:UniProtKB.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
 GO:0014069; C:postsynaptic density; ISS:UniProtKB.
 GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-KW.
 GO:0030018; C:Z disc; IDA:MGI.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0061001; P:regulation of dendritic spine morphogenesis; ISS:UniProtKB.
 GO:0051963; P:regulation of synapse assembly; ISS:UniProtKB. 
Interpro
 IPR001478; PDZ.
 IPR001781; Znf_LIM. 
Pfam
 PF00412; LIM
 PF00595; PDZ 
SMART
 SM00132; LIM
 SM00228; PDZ 
PROSITE
 PS00478; LIM_DOMAIN_1
 PS50023; LIM_DOMAIN_2
 PS50106; PDZ 
PRINTS