CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003048
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Holliday junction ATP-dependent DNA helicase RuvB 
Protein Synonyms/Alias
  
Gene Name
 ruvB 
Gene Synonyms/Alias
 b1860; JW1849 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
26ADRAIRPKLLEEYVGacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. 
Sequence Annotation
 NP_BIND 62 69 ATP (Potential).  
Keyword
 ATP-binding; Complete proteome; Cytoplasm; DNA damage; DNA recombination; DNA repair; Helicase; Hydrolase; Nucleotide-binding; Reference proteome; SOS response. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 336 AA 
Protein Sequence
MIEADRLISA GTTLPEDVAD RAIRPKLLEE YVGQPQVRSQ MEIFIKAAKL RGDALDHLLI 60
FGPPGLGKTT LANIVANEMG VNLRTTSGPV LEKAGDLAAM LTNLEPHDVL FIDEIHRLSP 120
VVEEVLYPAM EDYQLDIMIG EGPAARSIKI DLPPFTLIGA TTRAGSLTSP LRDRFGIVQR 180
LEFYQVPDLQ YIVSRSARFM GLEMSDDGAL EVARRARGTP RIANRLLRRV RDFAEVKHDG 240
TISADIAAQA LDMLNVDAEG FDYMDRKLLL AVIDKFFGGP VGLDNLAAAI GEERETIEDV 300
LEPYLIQQGF LQRTPRGRMA TTRAWNHFGI TPPEMP 336 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0048476; C:Holliday junction resolvase complex; IDA:EcoCyc.
 GO:0005524; F:ATP binding; IEA:HAMAP.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0009378; F:four-way junction helicase activity; IDA:EcoCyc.
 GO:0000725; P:recombinational repair; IMP:EcoCyc.
 GO:0009432; P:SOS response; IEP:EcoCyc. 
Interpro
 IPR003593; AAA+_ATPase.
 IPR004605; DNA_helicase_Holl-junc_RuvB.
 IPR008823; DNA_helicase_Holl-junc_RuvB_C.
 IPR008824; DNA_helicase_Holl-junc_RuvB_N.
 IPR027417; P-loop_NTPase.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF05491; RuvB_C
 PF05496; RuvB_N 
SMART
 SM00382; AAA 
PROSITE
  
PRINTS