CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012496
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Platelet-activating factor acetylhydrolase IB subunit gamma 
Protein Synonyms/Alias
 PAF acetylhydrolase 29 kDa subunit; PAF-AH 29 kDa subunit; PAF-AH subunit gamma; PAFAH subunit gamma 
Gene Name
 PAFAH1B3 
Gene Synonyms/Alias
 PAFAHG 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
10GEENPASKPTPVQDVubiquitination[1, 2]
Reference
 [1] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Inactivates paf by removing the acetyl group at the sn-2 position. This is a catalytic subunit. Plays an important role during the development of brain. 
Sequence Annotation
 ACT_SITE 47 47 By similarity.
 ACT_SITE 192 192 By similarity.
 ACT_SITE 195 195 By similarity.
 MOD_RES 2 2 N-acetylserine.  
Keyword
 Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Hydrolase; Lipid degradation; Lipid metabolism; Polymorphism; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 231 AA 
Protein Sequence
MSGEENPASK PTPVQDVQGD GRWMSLHHRF VADSKDKEPE VVFIGDSLVQ LMHQCEIWRE 60
LFSPLHALNF GIGGDGTQHV LWRLENGELE HIRPKIVVVW VGTNNHGHTA EQVTGGIKAI 120
VQLVNERQPQ ARVVVLGLLP RGQHPNPLRE KNRQVNELVR AALAGHPRAH FLDADPGFVH 180
SDGTISHHDM YDYLHLSRLG YTPVCRALHS LLLRLLAQDQ GQGAPLLEPA P 231 
Gene Ontology
 GO:0005829; C:cytosol; IEA:Compara.
 GO:0003847; F:1-alkyl-2-acetylglycerophosphocholine esterase activity; IEA:EC.
 GO:0007420; P:brain development; IEA:Compara.
 GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
 GO:0006629; P:lipid metabolic process; TAS:ProtInc.
 GO:0007399; P:nervous system development; TAS:ProtInc.
 GO:0007283; P:spermatogenesis; IEA:Compara. 
Interpro
 IPR013831; SGNH_hydro-type_esterase_dom. 
Pfam
  
SMART
  
PROSITE
 PS01098; LIPASE_GDSL_SER 
PRINTS