CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023708
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Calcium-regulated heat stable protein 1 
Protein Synonyms/Alias
 Calcium-regulated heat-stable protein of 24 kDa; CRHSP-24 
Gene Name
 CARHSP1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
64ASQGPVYKGVCKCFCubiquitination[1, 2, 3]
68PVYKGVCKCFCRSKGubiquitination[2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Binds mRNA and regulates the stability of target mRNA. Binds single-stranded DNA (in vitro). 
Sequence Annotation
 DOMAIN 62 129 CSD.
 MOD_RES 2 2 N-acetylserine.
 MOD_RES 30 30 Phosphoserine.
 MOD_RES 32 32 Phosphoserine.
 MOD_RES 41 41 Phosphoserine.
 MOD_RES 45 45 Phosphothreonine.
 MOD_RES 52 52 Phosphoserine.
 MOD_RES 146 146 Phosphoserine.
 MOD_RES 147 147 Phosphoserine.  
Keyword
 3D-structure; Acetylation; Complete proteome; Cytoplasm; Phosphoprotein; Reference proteome; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 147 AA 
Protein Sequence
MSSEPPPPPQ PPTHQASVGL LDTPRSRERS PSPLRGNVVP SPLPTRRTRT FSATVRASQG 60
PVYKGVCKCF CRSKGHGFIT PADGGPDIFL HISDVEGEYV PVEGDEVTYK MCSIPPKNEK 120
LQAVEVVITH LAPGTKHETW SGHVISS 147 
Gene Ontology
 GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
 GO:0005829; C:cytosol; ISS:UniProtKB.
 GO:0043186; C:P granule; ISS:UniProtKB.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.
 GO:0019902; F:phosphatase binding; NAS:UniProtKB.
 GO:0035556; P:intracellular signal transduction; TAS:ProtInc.
 GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR019844; Cold-shock_CS.
 IPR011129; Cold_shock_prot.
 IPR002059; CSP_DNA-bd.
 IPR012340; NA-bd_OB-fold. 
Pfam
 PF00313; CSD 
SMART
 SM00357; CSP 
PROSITE
 PS00352; COLD_SHOCK 
PRINTS