CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018466
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Microtubule-associated proteins 1A/1B light chain 3A 
Protein Synonyms/Alias
 Autophagy-related protein LC3 A; Autophagy-related ubiquitin-like modifier LC3 A; MAP1 light chain 3-like protein 1; MAP1A/MAP1B light chain 3 A; MAP1A/MAP1B LC3 A; Microtubule-associated protein 1 light chain 3 alpha 
Gene Name
 Map1lc3a 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
51LPVLDKTKFLVPDHVubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Ubiquitin-like modifier involved in formation of autophagosomal vacuoles (autophagosomes). Whereas LC3s are involved in elongation of the phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a later stage in autophagosome maturation (By similarity). 
Sequence Annotation
 MOD_RES 12 12 Phosphoserine; by PKA (By similarity).
 LIPID 120 120 Phosphatidylethanolamine amidated glycine  
Keyword
 Autophagy; Complete proteome; Cytoplasm; Cytoplasmic vesicle; Cytoskeleton; Lipoprotein; Membrane; Microtubule; Phosphoprotein; Reference proteome; Ubl conjugation pathway. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 121 AA 
Protein Sequence
MPSDRPFKQR RSFADRCKEV QQIRDQHPSK IPVIIERYKG EKQLPVLDKT KFLVPDHVNM 60
SELVKIIRRR LQLNPTQAFF LLVNQHSMVS VSTPIADIYE QEKDEDGFLY MVYASQETFG 120
F 121 
Gene Ontology
 GO:0000421; C:autophagic vacuole membrane; IDA:MGI.
 GO:0031410; C:cytoplasmic vesicle; IEA:UniProtKB-KW.
 GO:0005829; C:cytosol; IEA:Compara.
 GO:0012505; C:endomembrane system; IEA:UniProtKB-SubCell.
 GO:0005770; C:late endosome; IEA:Compara.
 GO:0005874; C:microtubule; IEA:UniProtKB-KW.
 GO:0008429; F:phosphatidylethanolamine binding; IEA:Compara.
 GO:0000045; P:autophagic vacuole assembly; ISS:UniProtKB.
 GO:0000422; P:mitochondrion degradation; IEA:Compara. 
Interpro
 IPR004241; Atg8_ubiquitin-like. 
Pfam
 PF02991; Atg8 
SMART
  
PROSITE
  
PRINTS