CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035425
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Splicing factor YT521-B, isoform CRA_b 
Protein Synonyms/Alias
 YTH domain-containing protein 1 
Gene Name
 Ythdc1 
Gene Synonyms/Alias
 Yt521; rCG_57166 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
61SIDTKRQKPSIHSRQacetylation[1]
72HSRQLISKPLSSSVSacetylation[1]
82SSSVSNNKRIVSTKGacetylation[1]
90RIVSTKGKSVTEYKNacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 712 AA 
Protein Sequence
MAADSREEKD GELNVLDDIL TEVPEQDDEL YNPESEQDKN EKKGSKRKSE RMESIDTKRQ 60
KPSIHSRQLI SKPLSSSVSN NKRIVSTKGK SVTEYKNEEY QRSERNKRLD ADRKIRLSSS 120
SSREPYKSQP EKPCLRKRDS ERRAKSPTPD GSERIGLEVD RRASRSSQSS KEEGNSEEYG 180
SDHETGSSAS SEQGNNTENE EEGGEEDVEE DEEVDEDGDD DEEVDEDAEE EEDEEEDEEE 240
EDEEEEEEEE EEYEQDERDQ KEEGNDYDTR SEASDSGSES VSFTDGSVRS GSGTDGSDEK 300
KKERKRARGI SPIVFDRSGS SASESYADQT SKLKYVLQDA RFFLIKSNNH ENVSLAKAKG 360
VWSTLPVNEK KLNLAFRSAR SVILIFSVRE SGKFQGFARL SSESHHGGSP IHWVLPAGMS 420
AKMLGGVFKI DWICRRELPF TKSAHLTNPW NEHKPVKIGR DGQEIELECG TQLCLLFPPD 480
ESIDLYQLIH KMRHKRRMHS QPRSRGRPSR REPVRDVGRR RPEDYDIHNS RKKPRIDYPP 540
EFHQRPGYLK DPRYQEVDRR FSGVRRDVFL NGSYNDYVRE FHNMGPPPPW QGMPPYPGIE 600
QPPHHPYYQH HAPPPQAHPP YSGHHPVPHE ARYRDKRVHD YDMRVDDFLR RTQAVVSGRR 660
SRPRERDRER ERDRPRDNRR DRERDRGRDR ERERERICDR DRDRGERGRY RR 712 
Gene Ontology
  
Interpro
 IPR007275; YTH_domain. 
Pfam
 PF04146; YTH 
SMART
  
PROSITE
 PS50882; YTH 
PRINTS