CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-030128
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Histone H3 
Protein Synonyms/Alias
  
Gene Name
 H3F3B 
Gene Synonyms/Alias
 H3F3A; hCG_1984517; hCG_1989319 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
19TGGKAPRKQLATKAAubiquitination[1, 2]
24PRKQLATKAARKSAPubiquitination[1, 2]
37APSTGGVKKPHRYRPubiquitination[1]
57REIRRYQKSTELLIRubiquitination[1, 2]
80REIAQDFKTDLRFQSubiquitination[1, 2]
123KRVTIMPKDIQLARRubiquitination[1, 2]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
  
Sequence Annotation
  
Keyword
 Chromosome; DNA-binding; Nucleosome core; Nucleus. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 136 AA 
Protein Sequence
MARTKQTARK STGGKAPRKQ LATKAARKSA PSTGGVKKPH RYRPGTVALR EIRRYQKSTE 60
LLIRKLPFQR LVREIAQDFK TDLRFQSAAI GALQEASEAY LVGLFEDTNL CAIHAKRVTI 120
MPKDIQLARR IRGERA 136 
Gene Ontology
 GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0007420; P:brain development; IEA:Compara.
 GO:0006334; P:nucleosome assembly; IEA:InterPro.
 GO:0009725; P:response to hormone stimulus; IEA:Compara. 
Interpro
 IPR009072; Histone-fold.
 IPR007125; Histone_core_D.
 IPR000164; Histone_H3. 
Pfam
 PF00125; Histone 
SMART
 SM00428; H3 
PROSITE
 PS00322; HISTONE_H3_1
 PS00959; HISTONE_H3_2 
PRINTS
 PR00622; HISTONEH3.