CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039832
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Poly(A)-specific ribonuclease PARN 
Protein Synonyms/Alias
  
Gene Name
 PARN 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
151YVSPNTSKCPVTIPEubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 207 AA 
Protein Sequence
MEIIRSNFKS NLHKVYQAIE EADFFAIDGE FSGISDGPSV SALTNGFDTP EERYQKLKKH 60
SMDFLLFQFG LCTFKYDYTD SKSSPDVKFV CQSSSIDFLA SQGFDFNKVF RNGIPYLNQE 120
EERQLREQYD EKRSQANGAG ALSYVSPNTS KCPVTIPEDQ KKFIDQVVEK IEDLLQSEEN 180
KNLDLEPCTG FQRKLIYQTL SWKRSDI 207 
Gene Ontology
 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0003676; F:nucleic acid binding; IEA:InterPro. 
Interpro
 IPR001374; R3H_ss-bd.
 IPR006941; RNase_CAF1.
 IPR012337; RNaseH-like_dom. 
Pfam
 PF04857; CAF1
 PF01424; R3H 
SMART
  
PROSITE
 PS51061; R3H 
PRINTS