CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035839
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Receptor mediated endocytosis-8 
Protein Synonyms/Alias
  
Gene Name
 Dnajc13 
Gene Synonyms/Alias
 RME-8 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
305FIKGQVRKYSSTERDubiquitination[1]
685MHVRDNVKIAMDQYGubiquitination[1]
696DQYGKFNKVPEWQRLubiquitination[1]
853NEESGSIKRSYEFFNubiquitination[1]
974IEASPDMKRESEKEWubiquitination[1]
988WYFGNADKERSGPYGubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
  
Sequence Annotation
  
Keyword
 Receptor. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 2248 AA 
Protein Sequence
MNIIRENKDL ACFYTTKHSW RGKYKRVFSV GTHAVTTYNP NTLEVTNQWP YGDICSISPV 60
GKGQGTEFNL TFRKGSGKKS ETLKFSTEHR TELLTEALRF RTDFAEGKIT GRRYNCYKHH 120
WSDAKKPVVL EVTPGGFDQI NPVTNRVLCS YDYRNIEGFV DLSDYQGGFC ILYGGFSRLH 180
LFSSEQREEI IKSAIEHAGN YIGISLRIRK EPLEFEQYLN LRFGKYSTDE SITSLAEFVV 240
QKISPRHSEP VKRVLAVTET CLVERDPATY NIATLKPLGE VFALVCDSEN PQLFTIEFIK 300
GQVRKYSSTE RDSLLASLLD GVRASGNRDV CVKMAPTHKG QRWGLLSMPI DEEVESLHLR 360
FLAAPPNGNF ADAVFRFNAN ISYSGVLHAV TQDGLFSENK EKLINNAITA LLSQEGDVVA 420
SNAELESQFQ AVRRLVASKA GFLAFTQLPK FRERLGMKVV KALKRSNNGV IHAAVDMLCA 480
LMCPMHDDYD LRQEQLNKAS LLSSKKFLEN LLEKFNSHVD HGTGALVISS LLDFLTFALC 540
APYSETTEGQ QFDMLLEMVA SNGRTLFKLF QHPSMAIVKG AGLVMKAIIE EGDREIATKM 600
QELALSEGAL PRHLHTAMFT ISSDQRMLTN RQLSRHLVGL WTADNTTATN LLKRILPPGL 660
LAYLDSSDPV PEKDADRMHV RDNVKIAMDQ YGKFNKVPEW QRLAGKAAKE VEKFAKEKVD 720
LVLMHWRDRM GIAQKEDKNH MNINQKPVVL RKRRQRIKIE ANWDLFYYRF SQDHARSNLI 780
WNFKTREELK DALESEMRTF NIDRELGSAS VISWNHHEFE VKYECLAEEI KIGDYYLRLL 840
LEEDENEESG SIKRSYEFFN ELYHRFLLTP KVNMKCLCLQ ALAIVYGRCH EEIGPFTDTR 900
YIIGMLERCT DKLERDRLIL FLNKLILNKK NVKDLMDSNG IRILVDLLTL AHLHVSRATV 960
PLQSNVIEAS PDMKRESEKE WYFGNADKER SGPYGFHEMQ ELWAKGMLNA KTRCWAQGMD 1020
GWRPLQAIPQ LKWCLLASGQ AVLNETDLAT LILNMLITMC GYFPSRDQDN AIIRPLPRVK 1080
RLLSDSTCLP HVIQLLLTFD PILVEKVAIL LHHIMQDNPQ LPRLYLSGVF FFIMMYTGSN 1140
VLPVARFLKY THSKQAFKSE ETKGQDIFQR SILGHILPEA MVCYLENYEP EKFSEIFLGE 1200
FDTPEAIWSS EMRRLMIEKI AAHLADFTPR LQSNTRALYQ YCPIPVINYP QLENELFCNI 1260
YYLKQLCDTL RFPDWPIKDP VKLLKDSLDA WKKEVEKKPP MMSIDDAYEV LNLPIGQGLH 1320
DESKIRKAYF RLAQKYHPDK NPEGRDMFEK VNKAYEFLCT KSTKIVDGPD PENIILILKT 1380
QSILFNRHKE ELQPYKYAGY PMLIRTITME TSDDLLFSKE SPLLPAAAEL AFHTVNCSAL 1440
NAEELRRENG LEVLQEAFSR CVAVLNRSSK PSDMSVQVCG HISRCYSVAA QFEECREKIT 1500
EMPGIIKDLC RVLYFGKCIP RVAALAVECV SSFAVDFWLQ THLFQAGILW YLLVYLFNYD 1560
YTLEESGIQK NEETNQQEVA NSLAKLSVHA LSRLGGYLSE DQATPENPTV RKSLAGMLTP 1620
YIARKLAVAS ATETLKMLNS NTESPYLMWN NSTRAELLEF LESQQENMIK KGDCDKTYGA 1680
EFVYSEHAKE LIVGEIFVRV YNEVPTFQLE VPKEFAASLL DYIGSQAQYL HTFMAITHAA 1740
KVESEQHGDR LPRVEMALEA LRNVIKYNPG SESECIGHFK LIFSLLRVHG AGQVQQLALE 1800
VVNIVTSNQD CVNNIAESMV LSNLLALLHS LPSSRQLVLE TLYALASNTK IIKEAMAKGA 1860
LIYLLDMFCN STHPQVRSQT AELFAKMTAD KLIGPKVRIT LMKFLPSVFM DAMRDNPEAA 1920
VHIFEGTHEN PELIWNDSSR DKVSTTVREM MLEHFKNQRD NPDVNWKLPE DFAVVFGEAE 1980
GELAVGGVFL RIFIAQPAWV LRKPREFLIA LLEKLTELLE KNNPHGETLE TLTMATVCLF 2040
SAQPQLADQV PPLGHLPKVI QAMNHRNNAI PKSAIRVIHV LSDNELCVRA MASLETIGPL 2100
MNGMRKRADT VGLACEAINR MFQKEQSELV AQALKAELVP YLLKLLEGVG LENLDSPAAT 2160
KAQIVKALKA MTRSLQYGEQ VSEILSRSSV WSAFKDQKHD LFISDSQTAG YLTGPGVAGY 2220
LTAGTSSSAM SNLPPPVDHE AGDLGYQT 2248 
Gene Ontology
  
Interpro
 IPR011989; ARM-like.
 IPR016024; ARM-type_fold.
 IPR001623; DnaJ_domain.
 IPR025640; DUF4339. 
Pfam
 PF00226; DnaJ
 PF14237; DUF4339 
SMART
 SM00271; DnaJ 
PROSITE
 PS50076; DNAJ_2 
PRINTS