CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021568
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial 
Protein Synonyms/Alias
 Oxygen-independent coproporphyrinogen-III oxidase-like protein RSAD1 
Gene Name
 RSAD1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
60CSYCNFNKYIPRRLEubiquitination[1]
331LEPDNWMKEVMLFGHubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 May be involved in porphyrin cofactor biosynthesis (By similarity). 
Sequence Annotation
 REGION 99 100 S-adenosyl-L-methionine 2 binding (By
 METAL 49 49 Iron-sulfur (4Fe-4S-S-AdoMet)
 METAL 53 53 Iron-sulfur (4Fe-4S-S-AdoMet)
 METAL 56 56 Iron-sulfur (4Fe-4S-S-AdoMet)
 BINDING 43 43 S-adenosyl-L-methionine 1 (By
 BINDING 55 55 S-adenosyl-L-methionine 2; via carbonyl
 BINDING 98 98 S-adenosyl-L-methionine 1; via amide
 BINDING 131 131 S-adenosyl-L-methionine 1 (By
 BINDING 158 158 S-adenosyl-L-methionine 2 (By
 BINDING 170 170 S-adenosyl-L-methionine 2 (By
 BINDING 195 195 S-adenosyl-L-methionine 2 (By  
Keyword
 4Fe-4S; Complete proteome; Iron; Iron-sulfur; Metal-binding; Mitochondrion; Oxidoreductase; Polymorphism; Porphyrin biosynthesis; Reference proteome; S-adenosyl-L-methionine; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 442 AA 
Protein Sequence
MALPGARARG WAAAARAAQR RRRVENAGGS PSPEPAGRRA ALYVHWPYCE KRCSYCNFNK 60
YIPRRLEEAA MQKCLVTEAQ TLLRLSGVQR VESVFFGGGT PSLASPHTVA AVLEAVAQAA 120
HLPADLEVTL EANPTSAPGS RLAEFGAAGV NRLSIGLQSL DDTELRLLGR THSACDALRT 180
LAEARRLFPG RVSVDLMLGL PAQQVGPWLG QLQELLHHCD DHLSLYQLSL ERGTALFAQV 240
QRGALPAPDP ELAAEMYQRG RAVLREAGFH QYEVSNFARN GALSTHNWTY WQCGQYLGVG 300
PGAHGRFMPQ GAGGHTREAR IQTLEPDNWM KEVMLFGHGT RKRVPLGRLE LLEEVLALGL 360
RTDVGITHQH WQQFEPQLTL WDVFGANKEV QELLERGLLQ LDHRGLRCSW EGLAVLDSLL 420
LTLLPQLQEA WQQRTPSPVP GG 442 
Gene Ontology
 GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
 GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
 GO:0004109; F:coproporphyrinogen oxidase activity; IEA:InterPro.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0006779; P:porphyrin-containing compound biosynthetic process; IEA:UniProtKB-KW. 
Interpro
 IPR004559; Coprogen_oxidase_HemN-rel.
 IPR006638; Elp3/MiaB/NifB.
 IPR010723; HemN_C_dom.
 IPR007197; rSAM.
 IPR023404; rSAM_horseshoe. 
Pfam
 PF06969; HemN_C
 PF04055; Radical_SAM 
SMART
 SM00729; Elp3 
PROSITE
  
PRINTS