CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-014706
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 PDZ and LIM domain protein 3 
Protein Synonyms/Alias
 Actinin-associated LIM protein; Alpha-actinin-2-associated LIM protein; SK-2 
Gene Name
 Pdlim3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
112EAEPQEFKPIGTAHNacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 May play a role in the organization of actin filament arrays within muscle cells (By similarity). 
Sequence Annotation
 DOMAIN 1 84 PDZ.
 DOMAIN 290 349 LIM zinc-binding.  
Keyword
 Alternative splicing; Complete proteome; Cytoplasm; LIM domain; Metal-binding; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 362 AA 
Protein Sequence
MPQNVVLPGP APWGFRLSGG IDFNQPLVIT RITPGSKAEA ANLCPGDVIL AIDGFGTESM 60
THADAQDRIK AASYQLCLKI DRAETRLCPA VSEDGKAHPF KINLEAEPQE FKPIGTAHNR 120
RAQPFVAAAN IDDKRQVVSA SYNSPIGLYS TSNIRDALHG QLRGLIPSSP QNEPTASVPP 180
QSDVYRMLHD NRDEPAAPRQ SGSFRVLQEL VNDGSDDRPA GTRSVRPVTK VHGGAGGAQR 240
MPLCDKCGSG IVGAVVKARD KYRHPECFVC ADCNLNLKQK GYFFVEGELY CEMHARARTR 300
PPEGYDTVTL YPKA 314 
Gene Ontology
 GO:0030018; C:Z disc; IDA:RGD.
 GO:0042805; F:actinin binding; IDA:RGD.
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR001478; PDZ.
 IPR006643; ZASP.
 IPR001781; Znf_LIM. 
Pfam
 PF00412; LIM
 PF00595; PDZ 
SMART
 SM00132; LIM
 SM00228; PDZ
 SM00735; ZM 
PROSITE
 PS00478; LIM_DOMAIN_1
 PS50023; LIM_DOMAIN_2
 PS50106; PDZ 
PRINTS