CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035720
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Smchd1 
Protein Synonyms/Alias
  
Gene Name
 Smchd1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
7*MAAEGAKDPGGLSKacetylation[1]
1798LPHFRNGKLHFKPFGacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 2006 AA 
Protein Sequence
MAAEGAKDPG GLSKGSGRDG DIDGCRTVYL FDRRGKDSEL GDRALQVPER AGYAEFRASV 60
CQTIGISSEE KFVITTTSRK EITCDNFDDT VKDGVTLYLL QSVDQSLLTA TKERIDFVPH 120
YDTLVKSGMY EYYASEGQNP LPFALAELID NSLSATSRNV GVRRIQIKLL FDETQGKPAV 180
AVVDNGRGMT SKQLNNWAVY RLSKFTRQGD FESDHSGYVR PVPVPRSLNS DISYFGVGGK 240
QAVFFVGQSA RMISKPIDSK DVHELVLSKE DFEKKEKNKE AIYSGYIRNR KPADSVHITN 300
DDERFLHNLI VEEKEKDSFT AVVITGVQPE HIQYLKNYFH LWTRQLTHIY HYYIHGPKGN 360
EISTAKDVGP FNNIDIEISL FEKGKTPKIV NLREIQDDMQ TLYINTASDS FEFKAHVEGD 420
GVVEGVIRYH PFLYDRETYP DDPCFPSKLR DEDDDDDCFI PEKAARGKRP IFECFWNGRL 480
IPYTSVEDFD WCAPPKKRGL APIECFNRIS GALFTNDKFQ VSTNKLTFMD LELKLKDKNT 540
LFTRILNGQE QRMKIDREFA LWLKDCHEKH DKQIKFTLFK GIITRPDLPS KKQGPWATFS 600
AIEWDGKIYK AGQLVKTIKT LPLFYGSIVR FFLHGDHDGE VYATGGEVQI AMEPQALYDE 660
IKTVPIAKLD RTVAEKTIRK YVEDEMARLP DRLSVTWPEG DELVPNEVRP AGTPIGALRI 720
EILNKKGEAM QKLPGTSHGG SKKLLVELKV ILHTSSGNKE IISHISQHGG KWPYWFKKME 780
NIQKLGNYTL KLQVVLNESN ADTYAGRSLP SKAIKFSVKE GKPEKFSFGL LDSPFRVGVP 840
FNIPLEFQDE FGHTTQLLSD IQPVLEASGL SLHYEEITKG PNCVIQGVIA KGPVNSCQGK 900
NFNLKVILPG LKEDSQILKI RLLPGPPHRL KVKPDSEILV IENGTAFPFQ VEVVDESDNI 960
TAQPKLIVHC KFLGAPNLPV YTVDCSSSGT SILTGSPIQV QNIKKDQTLT ARIEIPSCKD 1020
VSPVEKTIKL LPSSHVACLQ IFSVEGQKAI QIKHQDEVNW IAGDVMRNLI FQMYDEGERE 1080
INITPSLAEK IKVNWTPEVN KEHLVQGLLP DVQVPTSVKD VRYCQVSFQD DHVSLESAFT 1140
VRPLPDDPKH LKCVLKGGKT VQMGQELQGE IVVIIVDQYG NQISAFSSDS LSTLSISGDG 1200
LDSKNLKTTL ETSTQSISVQ GIRFTPGPPG PKDLCFTWRE FSDFIRVHLI SGPPTKLLLI 1260
DWPELKESIP VINGRQLQNP LIVQLCDQWD NPALVPNVKI CLIKASSLKL VPSNQQHKPD 1320
DKGRANLGMF TVFAPRGEHT VQVKGVYNKS TIEGPTIKLM ILPDPEKPIR LNVKYDKDAS 1380
FIAGDIFTDF MVSVISEGGS VIKNINPTRI SMKMWKLSSG MSRPPANAEI FSCNKIKDND 1440
KEDGCFYFRE KTIPCKVGAY CIQFDFMIDK TNMLSSEQVI VDVLPNQPMK LVPDTQPATP 1500
AVSNVRSIAS RTLVKDLRLS ITDNYGNHTG MDLVGTVVAT IKGFNEEDTD TPLFIGKVRT 1560
LEFPFVNGSA EITTLVLAEN SPGRDSTEYF IIFEPRLSTL SSTLESYSLP FMFYNDVKKQ 1620
QQMAALTKEK DELSKSITMY RSLFDANKQL LDEMKCQAEE AKFKETQLRN ELKAHNIDIP 1680
ATQQIPHIEA LLEKKIAEQN ELKKRPRRLC TLPNYTKRSG DILGKIAHLA QIEDDRAAMV 1740
ISWHLASDMD CVVTLTTDAA RCIYDETQGR QQVLPLDSIY RKTLPDWKRP LPHFRNGKLH 1800
FKPFGDPVFA RDLLTFPDNI EHCETVFGML LGDTIILDNL DAANHYRKEV VKITHCPTLL 1860
TRDGDRIRSN GKFGGLQNKA PPMDKLRGMV FGAPVPKQCV DLGKQIDLIQ QYRNALCKLN 1920
SVRADLDHQL QYLHTPDMKR KKQELDEQEK SLKRIEQKLG MTPMRRCSDS LCLSPKIEVT 1980
ECPIPTKRMR RESIRQNRRP KGDVPN 2006 
Gene Ontology
 GO:0001740; C:Barr body; IEA:Compara.
 GO:0005524; F:ATP binding; IEA:InterPro.
 GO:0051276; P:chromosome organization; IEA:InterPro.
 GO:0060821; P:inactivation of X chromosome by DNA methylation; IEA:Compara. 
Interpro
 IPR003594; HATPase_ATP-bd.
 IPR010935; SMC_hinge. 
Pfam
 PF06470; SMC_hinge 
SMART
 SM00968; SMC_hinge 
PROSITE
  
PRINTS