CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026038
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Sigma-L-dependent transcriptional regulator 
Protein Synonyms/Alias
  
Gene Name
 GK0196 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Geobacillus kaustophilus (strain HTA426) 
NCBI Taxa ID
 235909 
Lysine Modification
Position
Peptide
Type
References
558RFAEKYQKPLVFTDGacetylation[1]
Reference
 [1] Proteomic analysis of acetylation in thermophilic Geobacillus kaustophilus.
 Lee DW, Kim D, Lee YJ, Kim JA, Choi JY, Kang S, Pan JG.
 Proteomics. 2013 Aug;13(15):2278-82. [PMID: 23696451
Functional Description
  
Sequence Annotation
  
Keyword
 ATP-binding; Complete proteome; DNA-binding; Nucleotide-binding; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 687 AA 
Protein Sequence
MTIEDIMWKT TAAVWESDSL EQAARTLAKQ GMAGAIACDS EGEMVGVVAA EDVLFGLAQG 60
RKTVREVMRP PQPLPVHARL EEVAFGGSPL RAVVDESGRL AGLLTKEQYL AAQAKASRLR 120
LKQLEAMFNA AHNGILSIDA KGRITSINPA AERMARTTKE EALGRLLTDV VVPSGLLDVV 180
RTGQGCTEKY RVGKRVYITN RSPIVDDGKV VGAVGVFQDI SEIEFISSEL ETVKRIANEL 240
QTVMDAATDG IAIADRNGAI TRQNQKWAAL FPDAGQGRIP APLDQVVRQA LDRCQPCSML 300
HQGAETGNTL IVSAVPIIEE DGRAERVVLY VKDMTEMEQL RSELEETKRL LHMLGRQEED 360
HLIYRAPAMA HVVNIARQAA AVDVTLLLTG ESGTGKEELA NYIWKQSARR ARPFVKVNCG 420
AIPETLMESE LFGYEPGAFT GAAKKGKKGY FEQADGGTIF LDEISEIPLH LQVKLLRVLQ 480
SMEIMRLGAE APKRIDVRVI AATNKPLEEL VAAGRFRADL FYRLNVMPIA IPPLRDRKED 540
IPLLVDHYRK RFAEKYQKPL VFTDGALAAM MDYHWPGNVR ELVNAVERMF VTAVSPVIDE 600
HQVAKWLHLE PEPAASPVAV GEIIPLKQAT AEVERQLIIK ALHKAKTYRR AAKLLGVDAS 660
TLVRKAQKYG IQSWGGEEDG FHAASRD 687 
Gene Ontology
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
 GO:0000155; F:phosphorelay sensor kinase activity; IEA:InterPro.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0023014; P:signal transduction by phosphorylation; IEA:GOC.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR003593; AAA+_ATPase.
 IPR000644; Cysta_beta_synth_core.
 IPR009057; Homeodomain-like.
 IPR002197; HTH_Fis.
 IPR027417; P-loop_NTPase.
 IPR001610; PAC.
 IPR000014; PAS.
 IPR000700; PAS-assoc_C.
 IPR013767; PAS_fold.
 IPR002078; Sigma_54_int.
 IPR025662; Sigma_54_int_dom_ATP-bd_1.
 IPR025943; Sigma_54_int_dom_ATP-bd_2.
 IPR025944; Sigma_54_int_dom_CS. 
Pfam
 PF00571; CBS
 PF02954; HTH_8
 PF00989; PAS
 PF13188; PAS_8
 PF00158; Sigma54_activat 
SMART
 SM00382; AAA
 SM00116; CBS
 SM00086; PAC
 SM00091; PAS 
PROSITE
 PS51371; CBS
 PS50113; PAC
 PS50112; PAS
 PS00675; SIGMA54_INTERACT_1
 PS00676; SIGMA54_INTERACT_2
 PS00688; SIGMA54_INTERACT_3
 PS50045; SIGMA54_INTERACT_4 
PRINTS