CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007177
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribosome-interacting GTPase 1 
Protein Synonyms/Alias
 GTP-binding protein RBG1; Genetically interacts with ribosomal genes protein 1 
Gene Name
 RBG1 
Gene Synonyms/Alias
 FUN11; YAL036C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
78VGFPSVGKSTLLSKLubiquitination[1]
127PGIIDGAKDGRGRGKubiquitination[1]
134KDGRGRGKQVIAVARubiquitination[1]
164HHKQIIEKELEGVGIubiquitination[1]
187ILIKKKEKGGISITNubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Involved in ribosomal function. 
Sequence Annotation
 DOMAIN 77 169 G.
 NP_BIND 72 79 GTP (By similarity).
 NP_BIND 118 122 GTP (By similarity).
 NP_BIND 250 253 GTP (By similarity).  
Keyword
 3D-structure; Complete proteome; Cytoplasm; GTP-binding; Nucleotide-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 369 AA 
Protein Sequence
MSTTVEKIKA IEDEMARTQK NKATSFHLGQ LKAKLAKLRR ELLTSASSGS GGGAGIGFDV 60
ARTGVASVGF VGFPSVGKST LLSKLTGTES EAAEYEFTTL VTVPGVIRYK GAKIQMLDLP 120
GIIDGAKDGR GRGKQVIAVA RTCNLLFIIL DVNKPLHHKQ IIEKELEGVG IRLNKTPPDI 180
LIKKKEKGGI SITNTVPLTH LGNDEIRAVM SEYRINSAEI AFRCDATVDD LIDVLEASSR 240
RYMPAIYVLN KIDSLSIEEL ELLYRIPNAV PISSGQDWNL DELLQVMWDR LNLVRIYTKP 300
KGQIPDFTDP VVLRSDRCSV KDFCNQIHKS LVDDFRNALV YGSSVKHQPQ YVGLSHILED 360
EDVVTILKK 369 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0005844; C:polysome; IDA:SGD.
 GO:0005525; F:GTP binding; ISS:SGD.
 GO:0002181; P:cytoplasmic translation; IGI:SGD. 
Interpro
 IPR006074; GTP1-OBG_CS.
 IPR006073; GTP_binding_domain.
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR004095; TGS.
 IPR012676; TGS-like. 
Pfam
 PF01926; MMR_HSR1
 PF02824; TGS 
SMART
  
PROSITE
 PS00905; GTP1_OBG 
PRINTS
 PR00326; GTP1OBG.