CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021773
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Na(+)/H(+) exchange regulatory cofactor NHE-RF3 
Protein Synonyms/Alias
 NHERF-3; C-terminal-linking and modulating protein; Dietary Pi-regulated RNA-1; Diphor-1; Na(+)/H(+) exchanger regulatory factor 3; Na/Pi cotransporter C-terminal-associated protein 1; NaPi-Cap1; PDZ domain-containing protein 1; Sodium-hydrogen exchanger regulatory factor 3 
Gene Name
 Pdzk1 
Gene Synonyms/Alias
 Clamp; Diphor1; Nherf3 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
28GFFLRIEKDTDGHLVacetylation[1]
46EEGSPAEKAGLLDGDacetylation[1]
65INGVFVDKEEHAQVVacetylation[1]
97DSYEKAVKHQVDLKEacetylation[1]
103VKHQVDLKELDQSPRacetylation[1]
235KRETASLKLLPHQPRacetylation[1]
269EQKGQIIKDIEPGSPacetylation[1]
322TTLLVLDKEADRIYSacetylation[1]
375TEDVGDHKPKLCRLIacetylation[1]
383PKLCRLIKEDDSYGFacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 A scaffold protein that connects plasma membrane proteins and regulatory components, regulating their surface expression in epithelial cells apical domains. May be involved in the coordination of a diverse range of regulatory processes for ion transport and second messenger cascades. In complex with SLC9A3R1, may cluster proteins that are functionally dependent in a mutual fashion and modulate the trafficking and the activity of the associated membrane proteins. May play a role in the cellular mechanisms associated with multidrug resistance through its interaction with ABCC2 and PDZK1IP1. May potentiate the CFTR chloride channel activity (By similarity). May function to connect SCARB1 with the cellular machineries for intracellular cholesterol transport and/or metabolism. May be involved in the regulation of proximal tubular Na(+)-dependent inorganic phosphate cotransport therefore playing an important role in tubule function (By similarity). Component of a complex, composed of PDZK1, SYNGAP1, KLHL17 and NMDA receptors. Interacts (via PDZ1 domain) directly with KLHL17; the interaction is important for integrity of actin cytoskeleton structures in neurons. 
Sequence Annotation
 DOMAIN 9 90 PDZ 1.
 DOMAIN 128 215 PDZ 2.
 DOMAIN 243 323 PDZ 3.
 DOMAIN 378 458 PDZ 4.
 MOD_RES 492 492 Phosphoserine (By similarity).
 MOD_RES 495 495 Phosphoserine (By similarity).
 MOD_RES 518 518 Phosphoserine (By similarity).  
Keyword
 Complete proteome; Cytoplasm; Membrane; Phosphoprotein; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 523 AA 
Protein Sequence
MASTFNPREC KLSKKEGQNY GFFLRIEKDT DGHLVRVIEE GSPAEKAGLL DGDRVLRING 60
VFVDKEEHAQ VVDLVRKSGN SVTLLVLDGD SYEKAVKHQV DLKELDQSPR EPALNEKKPD 120
LGMNGGVETC AQPRLCYLVK EGNSFGFSLK TIQGKKGVFL TDITPQGVAM KAGVLADDHL 180
IEVNGENVEN ASHEEVVEKV TKSGSRIMFL LVDKETARCH SEQKTPFKRE TASLKLLPHQ 240
PRVVVIKKGS NGYGFYLRAG PEQKGQIIKD IEPGSPAEAA GLKNNDLVVA VNGESVEALD 300
HDGVVEMIRN GGDQTTLLVL DKEADRIYSL ARFSPLLYCQ SQELPNGSVK EAPAPISAPL 360
EAPGSATTED VGDHKPKLCR LIKEDDSYGF HLNAIRGQPG SFVKEVQQGG PADKAGLENE 420
DIIIEVNGEN VQDEPYDRVV ERIKSSGEHV TLLVCGKVAY SYFQAKKIPI LSSLADPLVA 480
GPDAKGETEH DSAESTKDSS HPARDRTLSA ASHSSSNSED TVM 523 
Gene Ontology
 GO:0016324; C:apical plasma membrane; IDA:RGD.
 GO:0031526; C:brush border membrane; IEA:Compara.
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0045121; C:membrane raft; IDA:RGD.
 GO:0031528; C:microvillus membrane; IDA:RGD.
 GO:0005124; F:scavenger receptor binding; IDA:RGD.
 GO:0015879; P:carnitine transport; IEA:Compara.
 GO:0030301; P:cholesterol transport; NAS:RGD.
 GO:0090002; P:establishment of protein localization to plasma membrane; IEA:Compara.
 GO:0046907; P:intracellular transport; NAS:RGD.
 GO:0034767; P:positive regulation of ion transmembrane transport; IEA:Compara. 
Interpro
 IPR001478; PDZ. 
Pfam
 PF00595; PDZ 
SMART
 SM00228; PDZ 
PROSITE
 PS50106; PDZ 
PRINTS