CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023963
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Neuroplastin 
Protein Synonyms/Alias
 Stromal cell-derived receptor 1; SDR-1 
Gene Name
 NPTN 
Gene Synonyms/Alias
 SDFR1; SDR1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
144QDATMYCKSVGYPHPubiquitination[1]
248IVVYEKRKRPDEVPDubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Probable homophilic and heterophilic cell adhesion molecule involved in long term potentiation at hippocampal excitatory synapses through activation of p38MAPK. May also regulate neurite outgrowth by activating the FGFR1 signaling pathway. May play a role in synaptic plasticity (By similarity). 
Sequence Annotation
 DOMAIN 29 134 Ig-like 1.
 DOMAIN 148 235 Ig-like 2.
 DOMAIN 238 329 Ig-like 3.
 REGION 149 161 Narpin; mediates binding with FGFR1 and
 CARBOHYD 171 171 N-linked (GlcNAc...) (Potential).
 CARBOHYD 197 197 N-linked (GlcNAc...) (Potential).
 CARBOHYD 229 229 N-linked (GlcNAc...).
 CARBOHYD 284 284 N-linked (GlcNAc...).
 CARBOHYD 296 296 N-linked (GlcNAc...).
 CARBOHYD 317 317 N-linked (GlcNAc...) (Potential).
 DISULFID 52 116 By similarity.
 DISULFID 170 218 By similarity.
 DISULFID 259 316 By similarity.  
Keyword
 Alternative splicing; Cell adhesion; Cell membrane; Complete proteome; Direct protein sequencing; Disulfide bond; Glycoprotein; Immunoglobulin domain; Membrane; Neurogenesis; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 398 AA 
Protein Sequence
MSGSSLPSAL ALSLLLVSGS LLPGPGAAQN EPRIVTSEEV IIRDSPVLPV TLQCNLTSSS 60
HTLTYSYWTK NGVELSATRK NASNMEYRIN KPRAEDSGEY HCVYHFVSAP KANATIEVKA 120
APDITGHKRS ENKNEGQDAT MYCKSVGYPH PDWIWRKKEN GMPMDIVNTS GRFFIINKEN 180
YTELNIVNLQ ITEDPGEYEC NATNAIGSAS VVTVLRVRSH LAPLWPFLGI LAEIIILVVI 240
IVVYEKRKRP DEVPDDDEPA GPMKTNSTNN HKDKNLRQRN TN 282 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
 GO:0042734; C:presynaptic membrane; ISS:HGNC.
 GO:0050839; F:cell adhesion molecule binding; ISS:HGNC.
 GO:0005105; F:type 1 fibroblast growth factor receptor binding; ISS:UniProtKB.
 GO:0007204; P:elevation of cytosolic calcium ion concentration; ISS:UniProtKB.
 GO:0007156; P:homophilic cell adhesion; ISS:HGNC.
 GO:0060291; P:long-term synaptic potentiation; ISS:UniProtKB.
 GO:0045743; P:positive regulation of fibroblast growth factor receptor signaling pathway; ISS:UniProtKB.
 GO:0048170; P:positive regulation of long-term neuronal synaptic plasticity; ISS:HGNC.
 GO:0010976; P:positive regulation of neuron projection development; ISS:UniProtKB.
 GO:0001934; P:positive regulation of protein phosphorylation; ISS:UniProtKB. 
Interpro
 IPR007110; Ig-like_dom.
 IPR013783; Ig-like_fold.
 IPR013098; Ig_I-set.
 IPR003599; Ig_sub.
 IPR003598; Ig_sub2.
 IPR027112; Neuroplastin. 
Pfam
 PF07679; I-set 
SMART
 SM00409; IG
 SM00408; IGc2 
PROSITE
 PS50835; IG_LIKE 
PRINTS