CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-029887
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Upstream stimulatory factor 1 
Protein Synonyms/Alias
 Upstream transcription factor 1, isoform CRA_b 
Gene Name
 USF1 
Gene Synonyms/Alias
 hCG_20846 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
186VERRRRDKINNWIVQubiquitination[1, 2, 3]
207DCSMESTKSGQSKGGubiquitination[2, 3]
218SKGGILSKACDYIQEubiquitination[2]
260QVEDLKNKNLLLRAQubiquitination[2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 282 AA 
Protein Sequence
MKGQQKTAET EEGTVQIQEG AVATGEDPTS VAIASIQSAA TFPDPNVKYV FRTENGGQVM 60
YRVIQVSEGQ LDGQTEGTGA ISGYPATQSM TQAVIQGAFT SDDAVDTEGT AAETHYTYFP 120
STAVGDGAGG QFFVMMSPQE VLQGGSQRSI APRTHPYSPK SEAPRTTRDE KRRAQHNEVE 180
RRRRDKINNW IVQLSKIIPD CSMESTKSGQ SKGGILSKAC DYIQELRQSN HRLSEELQGL 240
DQLQLDNDVL RQQVEDLKNK NLLLRAQLRH HGLEVVIKND SN 282 
Gene Ontology
  
Interpro
 IPR011598; bHLH_dom. 
Pfam
 PF00010; HLH 
SMART
 SM00353; HLH 
PROSITE
 PS50888; BHLH 
PRINTS