CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042056
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Autophagy-related 16-like 1 (Yeast), isoform CRA_a 
Protein Synonyms/Alias
 Autophagy-related 16-like 1 gamma 
Gene Name
 Atg16l1 
Gene Synonyms/Alias
 Atg16L1 gamma; mCG_16203 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
529CSRDDLLKVIDLRTNubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
 Repeat; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 623 AA 
Protein Sequence
MSSGLRAADF PRWKRHIAEE LRRRDRLQRQ AFEEIILQYT KLLEKSDLHS VLTQKLQAEK 60
HDMPNRHEIS PGHDGAWNDS QLQEMAQLRI KHQEELTELH KKRGELAQLV IDLNNQMQQK 120
DKEIQMNEAK ISEYLQTISD LETNCLDLRT KLQDLEVANQ TLKDEYDALQ ITFTALEEKL 180
RKTTEENQEL VTRWMAEKAQ EANRLNAENE KDSRRRQARL QKELAEAAKE PLPVEQDDDI 240
EVIVDETSDH TEETSPVRAV SRAATKRLSQ PAGGLLDSIT NIFGLSESPL LGHHSSDAAR 300
RRSVSSIPVP QDIMDTHPAS GKDVRVPTTA SYVFDAHDGE VNAVQFSPGS RLLATGGMDR 360
RVKLWEAFGD KCEFKGSLSG SNAGITSIEF DSAGAYLLAA SNDFASRIWT VDDYRLRHTL 420
TGHSGKVLSA KFLLDNARIV SGSHDRTLKL WDLRSKVCIK TVFAGSSCND IVCTEQCVMS 480
GHFDKKIRFW DIRSESVVRE MELLGKITAL DLNPERTELL SCSRDDLLKV IDLRTNAVKQ 540
TFSAPGFKCG SDWTRVVFSP DGSYVAAGSA EGSLYVWSVL TGKVEKVLSK QHSSSINAVA 600
WAPSGLHVVS VDKGSRAVLW AQP 623 
Gene Ontology
 GO:0000421; C:autophagic vacuole membrane; IDA:MGI.
 GO:0000045; P:autophagic vacuole assembly; TAS:MGI. 
Interpro
 IPR013923; Autophagy-rel_prot_16.
 IPR020472; G-protein_beta_WD-40_rep.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR019775; WD40_repeat_CS.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF08614; ATG16
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS
 PR00320; GPROTEINBRPT.