CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003351
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DNA-binding protein HU-beta 
Protein Synonyms/Alias
 HU-1; NS1 
Gene Name
 hupB 
Gene Synonyms/Alias
 hopD; b0440; JW0430 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
9NKSQLIDKIAAGADIacetylation[1]
18AAGADISKAAAGRALacetylation[1]
53GFGTFAVKERAARTGacetylation[1]
67GRNPQTGKEITIAAAacetylation[1]
75EITIAAAKVPSFRAGacetylation[1]
86FRAGKALKDAVN***acetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. 
Sequence Annotation
  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; DNA condensation; DNA-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 90 AA 
Protein Sequence
MNKSQLIDKI AAGADISKAA AGRALDAIIA SVTESLKEGD DVALVGFGTF AVKERAARTG 60
RNPQTGKEIT IAAAKVPSFR AGKALKDAVN 90 
Gene Ontology
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IDA:EcoCyc. 
Interpro
 IPR023630; DNA-bd_HU/IHF.
 IPR000119; Hist_DNA-bd_bac.
 IPR020816; Histone-like_DNA-bd_CS.
 IPR010992; IHF-like_DNA-bd_dom. 
Pfam
 PF00216; Bac_DNA_binding 
SMART
 SM00411; BHL 
PROSITE
 PS00045; HISTONE_LIKE 
PRINTS
 PR01727; DNABINDINGHU.