CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-043707
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 RANBP2-like and GRIP domain-containing protein 5/6 
Protein Synonyms/Alias
  
Gene Name
 RGPD6 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
11EAKTAQEKDSLITPHubiquitination[1]
95KRIFSSEKSKPFVFGubiquitination[2]
97IFSSEKSKPFVFGNSubiquitination[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 202 AA 
Protein Sequence
XFDEAKTAQE KDSLITPHVS RSSTPRESPC GKIAVAILEE TTRERTDVIQ GDDVADAASE 60
VEVSSTSETT TKAVVSPPKF VFVSESVKRI FSSEKSKPFV FGNSSATGSL FGFSFNAPLK 120
SNNSETSSVA QSGSESKVEP KKCELSKNSD IEQSSDSKVK NLSASFPTEE SSINYTFKTP 180
EKGFNFSLFK SNPMAFWTST PS 202 
Gene Ontology
  
Interpro
  
Pfam
  
SMART
  
PROSITE
  
PRINTS