| Tag | Content |
|---|
| CPLM ID | CPLM-013541 |
UniProt Accession | |
Genbank Protein ID | |
Genbank Nucleotide ID | |
Protein Name | Putative ATP-dependent RNA helicase DHX30 |
Protein Synonyms/Alias | DEAH box protein 30 |
Gene Name | Dhx30 |
Gene Synonyms/Alias | |
Created Date | July 27, 2013 |
Organism | Rattus norvegicus (Rat) |
NCBI Taxa ID | 10116 |
Lysine Modification | Position | Peptide | Type | References |
|---|
| 629 | YLEDILAKLGKHQYP | acetylation | [1] |
|
Reference | [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns. Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV. Cell Rep. 2012 Aug 30;2(2):419-31. [ PMID: 22902405] |
Functional Description | Associates with mitochondrial DNA (By similarity). Required for optimal function of the zinc-finger antiviral protein ZC3HAV1. |
Sequence Annotation | DOMAIN 53 121 DRBM.
DOMAIN 444 612 Helicase ATP-binding.
DOMAIN 654 827 Helicase C-terminal.
NP_BIND 457 464 ATP (By similarity).
MOTIF 559 562 DEAH box. |
Keyword | ATP-binding; Complete proteome; Cytoplasm; Helicase; Hydrolase; Mitochondrion; Mitochondrion nucleoid; Nucleotide-binding; Reference proteome; RNA-binding. |
Sequence Source | UniProt (SWISSPROT/TrEMBL); GenBank; EMBL |
Protein Length | 1194 AA |
Protein Sequence | MFTLDSFRKD RTQHRQRQCK LPPPRLPPMC VNPAPGGTIS RASRDLLKEF PQPKNLLNSV 60
IGRALGISHA KDKLVYVHTN GPKKKKVTLH IKWPKSVEVE GYGSKKIDAE RQAAAAACQL 120
FKGWGLLGPR NELFDAAKYR VLADRFGSPA DSWWRPEPTM PPTSWRQLNP ENIRPAGTGG 180
LSRSLGREEE EDEEEELEEG TIDVTEFLSM TQQDSHNPLR DSRGGSFEMT DDDSAIRALT 240
QFPLPKNLLA KVIQIATSSS TAKNLMQFHT VGTKTKLATL TLLWPCPMTF VAKGRRKAEA 300
ENKAAALACK KLKSLGLVDR NNEPLTHAMY NLASLRELGE TQRRPCTIQV PEPILRKIEA 360
FLSHYPVDSS WISPELRLQS DDILPLGKDS GPLSDPITGK PYMPLSEAEE VRLSQSLLEL 420
WRRRGPIWQE APQLPVDPHR DTILSAIEQH PVVVISGDTG CGKTTRIPQL LLERYVTEGR 480
GARCNVIITQ PRRISAVSVA QRVSHELGPS LRRNVGFQVR LESKPPARGG ALLFCTVGIL 540
LRKLQSNPSL EGVSHVIVDE VHERDVNTDF LLILLKGLQR LNPALRLVLM SATGDNERFS 600
RYFGGCPVIK VPGFMYPVKE HYLEDILAKL GKHQYPHRHR HHESEDECAL DLDLVTDLVL 660
HIDARGEPGG ILCFLPGWQE IKGVQQRLQE ALGMHESKYL ILPVHSNIPM MDQKAIFQQP 720
PLGVRKIVLA TNIAETSITV NDIVHVVDSG LHKEERYDLK TKVSCLETVW VSRANVIQRR 780
GRAGRCQSGF AYHLFPRSRL EKMVPFQVPE ILRTPLENLV LQAKIHMPEK TAVEFLSKAV 840
DSPNIKAVDE AVILLQEIGV LDQREYLTTL GQRLAHISTD PRLAKAIVLA AIFRCLHPLL 900
VVVSCLTRDP FSSSLQNRAE VDKVKALLSH DSGSDHLAFV RAVAGWEEVL RWQDRTSREN 960
YLEENLLYAP SLRFIHGLIK QFSENIYEAF LVGKPSDCTL PSAQCNEYSE EEELVKGVLM 1020
AGLYPNLIQV RQGKVTRQGK FKPNSVTYRT KSGNILLHKS TINREATRLR SRWLTYFMAV 1080
KSNGSVFVRD SSQVHPLAVL LLTDGDVHIR DDGRRATISL SDSDLLRLEG DSRTVRLLRE 1140
LRRALGRMVE RSLRSELAAL PLSVQQEHGQ LLALLAELLR GPCGSFDVRK TADD 1194 |
Gene Ontology | GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB. GO:0005524; F:ATP binding; IEA:UniProtKB-KW. GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro. GO:0003682; F:chromatin binding; ISS:UniProtKB. GO:0003723; F:RNA binding; IEA:UniProtKB-KW. |
Interpro | |
Pfam | |
SMART | |
PROSITE | |
PRINTS | |