CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-044720
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Probable helicase with zinc finger domain 
Protein Synonyms/Alias
  
Gene Name
 HELZ 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
1177GPHPNLGKSPSPVQRubiquitination[1]
1282HEQNRNGKSDTNNSGubiquitination[2]
1294NSGPEINKIRTPEKKubiquitination[2]
1561PPVRADWKLTSSAEDubiquitination[2]
Reference
 [1] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1943 AA 
Protein Sequence
MEDRRAEKSC EQACESLKRQ DYEMALKHCT EALLSLGQYS MADFTGPCPL EIERIKIESL 60
LYRIASFLQL KNYVQADEDC RHVLGEGLAK GEDAFRAVLC CMQLKGKLQP VSTILAKSLT 120
GESLNGMVTK DLTRLKTLLS ETETATSNAL SGYHVEDLDE GSCNGWHFRP PPRGITSSEE 180
YTLCKRFLEQ GICRYGAQCT SAHSQEELAE WQKRYASRLI KLKQQNENKQ LSGSYMETLI 240
EKWMNSLSPE KVLSECIEGV KVEHNPDLSV TVSTKKSHQT WTFALTCKPA RMLYRVALLY 300
DAHRPHFSII AISAGDSTTQ VSQEVPENCQ EWIGGKMAQN GLDHYVYKVG IAFNTEIFGT 360
FRQTIVFDFG LEPVLMQRVM IDAASTEDLE YLMHAKQQLV TTAKRWDSSS KTIIDFEPNE 420
TTDLEKSLLI RYQIPLSADQ LFTQSVLDKS LTKSNYQSRL HDLLYIEEIA QYKEISKFNL 480
KVQLQILASF MLTGVSGGAK YAQNGQLFGR FKLTETLSED TLAGRLVMTK VNAVYLLPVP 540
KQKLVQTQGT KEKVYEATIE EKTKEYIFLR LSRECCEELN LRPDCDTQVE LQFQLNRLPL 600
CEMHYALDRI KDNGVLFPDI SMTPTIPWSP NRQWDEQLDP RLNAKQKEAV LAITTPLAIQ 660
LPPVLIIGPY GTGKTFTLAQ AVKHILQQQE TSRILICTHS NSAADLYIKD YLHPYVEAGN 720
PQARPLRVYF RNRWVKTVHP VVHQYCLISS AHSTFQMPQK EDILKHRVVV VTLNTSQYLC 780
QLDLEPGFFT HILLDEAAQA MECETIMPLA LATQNTRIVL AGDHMQLSPF VYSEFARERN 840
LHVSLLDRLY EHYPAEFPCR ILLCENYRSH EAIINYTSEL FYEGKLMASG KQPAHKDFYP 900
LTFFTARGED VQEKNSTAFY NNAEVFEVVE RVEELRRKWP VAWGKLDDGS IGVVTPYADQ 960
VFRIRAELRK KRLSDVNVER VLNVQGKQFR VLFLSTVRTR HTCKHKQTPI KKKEQLLEDS 1020
TEDLDYGFLS NYKLLNTAIT RAQSLVAVVG DPIALCSIGR CRKFWERFIA LCHENSSLHG 1080
ITFEQIKAQL EALELKKTYV LNPLAPEFIP RALRLQHSGS TNKQQQSPPK GKSLHHTQND 1140
HFQNDGIVQP NPSVLIGNPI RAYTPPPPLG PHPNLGKSPS PVQRIDPHTG TSILYVPAVY 1200
GGNVVMSVPL PVPWTGYQGR FAVDPRIITH QAAMAYNMNL LQTHGRGSPI PYGLGHHPPV 1260
TIGQPQNQHQ EKDQHEQNRN GKSDTNNSGP EINKIRTPEK KPTEPKQVDL ESNPQNRSPE 1320
SRPSVVYPST KFPRKDNLNP RHINLPLPAP HAQYAIPNRH FHPLPQLPRP PFPIPQQHTL 1380
LNQQQNNLPE QPNQIPPQPN QVVQQQSQLN QQPQQPPPQL SPAYQAGPNN AFFNSAVAHR 1440
PQSPPAEAVI PEQQPPPMLQ EGHSPLRAIA QPGPILPSHL NSFIDENPSG LPIGEALDRI 1500
HGSVALETLR QQQARFQQWS EHHAFLSQGS APYPHHHHPH LQHLPQPPLG LHQPPVRADW 1560
KLTSSAEDEV ETTYSRFQDL IRELSHRDQS ETRELAEMPP PQSRLLQYRQ VQSRSPPAVP 1620
SPPSSTDHSS HFSNFNDNSR DIEVASNPAF PQRLPPQIFN SPFSLPSEHL APPPLKYLAP 1680
DGAWTFANLQ QNHLMGPGFP YGLPPLPHRP PQNPFVQIQN HQHAIGQEPF HPLSSRTVSS 1740
SSLPSLEEYE PRGPGRPLYQ RRISSSSVQP CSEEVSTPQD SLAQCKELQD HSNQSSFNFS 1800
SPESWVNTTS STPYQNIPCN GSSRTAQPRE LIAPPKTVKP PEDQLKSENL EVSSSFNYSV 1860
LQHLGQFPPL MPNKQIAESA NSSSPQSSAG GKPAMSYASA LRAPPKPRPP PEQAKKSSDP 1920
LSLFQELSLG SSSGSNGFYS YFK 1943 
Gene Ontology
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR000571; Znf_CCCH. 
Pfam
 PF00642; zf-CCCH 
SMART
 SM00356; ZnF_C3H1 
PROSITE
 PS50103; ZF_C3H1 
PRINTS