CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-040268
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 
Protein Synonyms/Alias
  
Gene Name
 Jmjd6 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
14DALQLSVKEFVERYEubiquitination[1]
124LFQYAGEKRRPPYRWubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 309 AA 
Protein Sequence
DNVERADALQ LSVKEFVERY ERPYKPVVLL NAQEGWSAQE KWTLERLKRK YRNQKFKCGE 60
DNDGYSVKMK MKYYIEYMES TRDDSPLYIF DSSYGEHPKR RKLLEDYKVP KFFTDDLFQY 120
AGEKRRPPYR WFVMGPPRSG TGIHIDPLGT SAWNALVQGH KRWCLFPTNT PRELIKVTRE 180
EGGNQQDEAI TWFNVIYPRT QLPTWPPEFK PLEILQKPGE TVFVPGGWWH VVLNLDTTIA 240
ITQNFASSTN FPVVWHKTVR GRPKLSRKWY RTDTARAAAV QATPSHPVPL CPNPDLEGPA 300
LGDLETGAP 309 
Gene Ontology
 GO:0005886; C:plasma membrane; IDA:MGI.
 GO:0004872; F:receptor activity; IDA:MGI.
 GO:0001568; P:blood vessel development; IMP:MGI.
 GO:0007166; P:cell surface receptor signaling pathway; IDA:MGI.
 GO:0048821; P:erythrocyte development; IMP:MGI.
 GO:0007507; P:heart development; IMP:MGI.
 GO:0001822; P:kidney development; IMP:MGI.
 GO:0030324; P:lung development; IMP:MGI.
 GO:0042116; P:macrophage activation; IMP:MGI.
 GO:0070782; P:phosphatidylserine exposure on apoptotic cell surface; IDA:MGI.
 GO:0043654; P:recognition of apoptotic cell; IMP:MGI.
 GO:0060041; P:retina development in camera-type eye; IMP:MGI.
 GO:0033077; P:T cell differentiation in thymus; IMP:MGI. 
Interpro
 IPR003347; JmjC_dom. 
Pfam
 PF02373; JmjC 
SMART
 SM00558; JmjC 
PROSITE
 PS51184; JMJC 
PRINTS