CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012750
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Deoxyguanosine kinase, mitochondrial 
Protein Synonyms/Alias
 dGK 
Gene Name
 DGUOK 
Gene Synonyms/Alias
 DGK 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
56VGKSTFVKLLTKTYPacetylation[1, 2]
120FSFLSRLKVQLEPFPubiquitination[3]
129QLEPFPEKLLQARKPubiquitination[3, 4, 5]
135EKLLQARKPVQIFERubiquitination[3, 5]
275REVNTFVKNL*****acetylation[1]
275REVNTFVKNL*****ubiquitination[3, 5, 6]
Reference
 [1] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [5] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [6] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724
Functional Description
 Required for the phosphorylation of several deoxyribonucleosides and certain nucleoside analogs widely employed as antiviral and chemotherapeutic agents. 
Sequence Annotation
 NP_BIND 45 53 ATP.
 NP_BIND 206 208 ATP.
 ACT_SITE 141 141 Proton acceptor (Potential).
 BINDING 70 70 Substrate (By similarity).
 BINDING 100 100 Substrate.
 BINDING 111 111 Substrate.
 BINDING 118 118 Substrate.
 BINDING 142 142 Substrate.
 BINDING 147 147 Substrate (By similarity).
 BINDING 211 211 Substrate.
 MOD_RES 275 275 N6-acetyllysine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; ATP-binding; Complete proteome; Disease mutation; Kinase; Mitochondrion; Neuropathy; Nucleotide-binding; Reference proteome; Transferase; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 277 AA 
Protein Sequence
MAAGRLFLSR LRAPFSSMAK SPLEGVSSSR GLHAGRGPRR LSIEGNIAVG KSTFVKLLTK 60
TYPEWHVATE PVATWQNIQA AGTQKACTAQ SLGNLLDMMY REPARWSYTF QTFSFLSRLK 120
VQLEPFPEKL LQARKPVQIF ERSVYSDRYI FAKNLFENGS LSDIEWHIYQ DWHSFLLWEF 180
ASRITLHGFI YLQASPQVCL KRLYQRAREE EKGIELAYLE QLHGQHEAWL IHKTTKLHFE 240
ALMNIPVLVL DVNDDFSEEV TKQEDLMREV NTFVKNL 277 
Gene Ontology
 GO:0005829; C:cytosol; IEA:Compara.
 GO:0005759; C:mitochondrial matrix; TAS:Reactome.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0004138; F:deoxyguanosine kinase activity; IDA:UniProtKB.
 GO:0016773; F:phosphotransferase activity, alcohol group as acceptor; IEA:InterPro.
 GO:0046070; P:dGTP metabolic process; IEA:Compara.
 GO:0008617; P:guanosine metabolic process; TAS:ProtInc.
 GO:0010977; P:negative regulation of neuron projection development; IEA:Compara.
 GO:0006468; P:protein phosphorylation; IEA:Compara.
 GO:0046122; P:purine deoxyribonucleoside metabolic process; IDA:UniProtKB.
 GO:0006144; P:purine nucleobase metabolic process; TAS:Reactome.
 GO:0043101; P:purine-containing compound salvage; TAS:Reactome. 
Interpro
 IPR002624; Deoxynucleoside_kinase.
 IPR027417; P-loop_NTPase. 
Pfam
 PF01712; dNK 
SMART
  
PROSITE
  
PRINTS