CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042473
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Peroxisome proliferator-activated receptor gamma coactivator 1-beta 
Protein Synonyms/Alias
  
Gene Name
 PPARGC1B 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
44DVLCDVSKPYRLATPubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 748 AA 
Protein Sequence
XACSNPSQQV RSRPWSRHHS KASWAEFSIL RELLAQDVLC DVSKPYRLAT PVYASLTPRS 60
RPRPPKDSQA SPGRPSSVEE VRIAASPKST GPRPSLRPLR LEVKREVRRP ARLQQQEEED 120
EEEEEEEEEE EKEEEEEWGR KRPGRGLPWT KLGRKLESSV CPVRRSRRLN PELGPWLTFA 180
DEPLVPSEPQ GALPSLCLAP KAYDVERELG SPTDEDSGQD QQLLRGPQIP ALESPCESGC 240
GDMDEDPSCP QLPPRDSPRC LMLALSQSDP TFGKKSFEQT LTVELCGTAG LTPPTTPPYK 300
PTEEDPFKPD IKHSLGKEIA LSLPSPEGLS LKATPGAAHK LPKKHPERSE LLSHLRHATA 360
QPASQAGQKR PFSCSFGDHD YCQVLRPEGV LQRKVLRSWE PSGVHLEDWP QQGAPWAEAQ 420
APGREEDRSC DAGAPPKDST LLRDHEIRAS LTKHFGLLET ALEEEDLASC KSPEYDTVFE 480
DSSSSSGESS FLPEEEEEEG EEEEEDDEEE DSGVSPTCSD HCPYQSPPSK ANRQLCSRSR 540
SSSGSSPCHS WSPATRRNFR CESRGPCSDR TPSIRHARKR REKAIGEGRV VYIQNLSSDM 600
SSRELKRRFE VFGEIEECEV LTRNRRGEKY GFITYRCSEH AALSLTKGAA LRKRNEPSFQ 660
LSYGGLRHFC WPRYTDYGWQ AVPTVQRSSQ LPKALGCSHS TVPTHSGRFF NHPVFVSCSL 720
PSPLPCLFTP MPRFQFRRGP SCVREKQV 748 
Gene Ontology
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0000166; F:nucleotide binding; IEA:InterPro. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS