CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001448
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Complement component C1q receptor 
Protein Synonyms/Alias
 C1q/MBL/SPA receptor; C1qR(p); C1qRp; Cell surface antigen AA4; Complement component 1 q subcomponent receptor 1; Lymphocyte antigen 68; Ly-68; CD93 
Gene Name
 Cd93 
Gene Synonyms/Alias
 Aa4; C1qr1; C1qrp; Ly68 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
612KEEIKEKKPQNAADSubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Receptor (or element of a larger receptor complex) for C1q, mannose-binding lectin (MBL2) and pulmonary surfactant protein A (SPA). May mediate the enhancement of phagocytosis in monocytes and macrophages upon interaction with soluble defense collagens. May play a role in intercellular adhesion. Marker for early multipotent hematopoietic precursor cells. May play a role in cell-cell interactions during hematopoietic and vascular development. 
Sequence Annotation
 DOMAIN 31 173 C-type lectin.
 DOMAIN 257 298 EGF-like 1.
 DOMAIN 299 341 EGF-like 2.
 DOMAIN 342 381 EGF-like 3; calcium-binding (Potential).
 DOMAIN 382 423 EGF-like 4; calcium-binding (Potential).
 DOMAIN 424 465 EGF-like 5; calcium-binding (Potential).
 MOD_RES 636 636 Phosphotyrosine.
 CARBOHYD 102 102 N-linked (GlcNAc...) (Potential).
 CARBOHYD 322 322 N-linked (GlcNAc...) (Potential).
 DISULFID 140 164 By similarity.
 DISULFID 261 272 By similarity.
 DISULFID 268 282 By similarity.
 DISULFID 284 297 By similarity.
 DISULFID 303 314 By similarity.
 DISULFID 308 325 By similarity.
 DISULFID 327 340 By similarity.
 DISULFID 346 355 By similarity.
 DISULFID 351 364 By similarity.
 DISULFID 366 380 By similarity.
 DISULFID 386 397 By similarity.
 DISULFID 393 406 By similarity.
 DISULFID 408 422 By similarity.
 DISULFID 428 440 By similarity.
 DISULFID 436 449 By similarity.
 DISULFID 451 464 By similarity.  
Keyword
 Cell adhesion; Complete proteome; Disulfide bond; EGF-like domain; Glycoprotein; Lectin; Membrane; Phosphoprotein; Receptor; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 644 AA 
Protein Sequence
MAISTGLFLL LGLLGQPWAG AAADSQAVVC EGTACYTAHW GKLSAAEAQH RCNENGGNLA 60
TVKSEEEARH VQQALTQLLK TKAPLEAKMG KFWIGLQREK GNCTYHDLPM RGFSWVGGGE 120
DTAYSNWYKA SKSSCIFKRC VSLILDLSLT PHPSHLPKWH ESPCGTPEAP GNSIEGFLCK 180
FNFKGMCRPL ALGGPGRVTY TTPFQATTSS LEAVPFASVA NVACGDEAKS ETHYFLCNEK 240
TPGIFHWGSS GPLCVSPKFG CSFNNGGCQQ DCFEGGDGSF RCGCRPGFRL LDDLVTCASR 300
NPCSSNPCTG GGMCHSVPLS ENYTCRCPSG YQLDSSQVHC VDIDECQDSP CAQDCVNTLG 360
SFHCECWVGY QPSGPKEEAC EDVDECAAAN SPCAQGCINT DGSFYCSCKE GYIVSGEDST 420
QCEDIDECSD ARGNPCDSLC FNTDGSFRCG CPPGWELAPN GVFCSRGTVF SELPARPPQK 480
EDNDDRKEST MPPTEMPSSP SGSKDVSNRA QTTGLFVQSD IPTASVPLEI EIPSEVSDVW 540
FELGTYLPTT SGHSKPTHED SVSAHSDTDG QNLLLFYILG TVVAISLLLV LALGILIYHK 600
RRAKKEEIKE KKPQNAADSY SWVPERAESQ APENQYSPTP GTDC 644 
Gene Ontology
 GO:0009986; C:cell surface; IDA:MGI.
 GO:0016023; C:cytoplasmic membrane-bounded vesicle; IDA:MGI.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005886; C:plasma membrane; IDA:MGI.
 GO:0005509; F:calcium ion binding; IEA:InterPro.
 GO:0030246; F:carbohydrate binding; IEA:InterPro.
 GO:0016337; P:cell-cell adhesion; ISS:UniProtKB. 
Interpro
 IPR001304; C-type_lectin.
 IPR016186; C-type_lectin-like.
 IPR016187; C-type_lectin_fold.
 IPR016316; CD93/CD141.
 IPR026823; cEGF.
 IPR000742; EG-like_dom.
 IPR001881; EGF-like_Ca-bd.
 IPR013032; EGF-like_CS.
 IPR000152; EGF-type_Asp/Asn_hydroxyl_site.
 IPR018097; EGF_Ca-bd_CS. 
Pfam
 PF12662; cEGF
 PF00059; Lectin_C 
SMART
 SM00034; CLECT
 SM00181; EGF
 SM00179; EGF_CA 
PROSITE
 PS00010; ASX_HYDROXYL
 PS00615; C_TYPE_LECTIN_1
 PS50041; C_TYPE_LECTIN_2
 PS01186; EGF_2
 PS50026; EGF_3
 PS01187; EGF_CA 
PRINTS