CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002821
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 T-cell surface glycoprotein CD3 gamma chain 
Protein Synonyms/Alias
 T-cell receptor T3 gamma chain; CD3g 
Gene Name
 CD3G 
Gene Synonyms/Alias
 T3G 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
32IKGNHLVKVYDYQEDubiquitination[1]
57AKNITWFKDGKMIGFubiquitination[1]
60ITWFKDGKMIGFLTEubiquitination[1]
69IGFLTEDKKKWNLGSubiquitination[1]
70GFLTEDKKKWNLGSNubiquitination[1]
71FLTEDKKKWNLGSNAubiquitination[1]
79WNLGSNAKDPRGMYQubiquitination[1, 2]
88PRGMYQCKGSQNKSKubiquitination[1]
95KGSQNKSKPLQVYYRubiquitination[1]
150RQSRASDKQTLLPNDubiquitination[1, 2, 3]
164DQLYQPLKDREDDQYubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
 The CD3 complex mediates signal transduction. 
Sequence Annotation
 DOMAIN 37 94 Ig-like.
 DOMAIN 149 177 ITAM.
 MOTIF 153 154 Di-leucine motif.
 MOD_RES 145 145 Phosphoserine.
 MOD_RES 148 148 Phosphoserine.
 CARBOHYD 52 52 N-linked (GlcNAc...) (Potential).
 CARBOHYD 92 92 N-linked (GlcNAc...) (Potential).
 DISULFID 46 87  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Disulfide bond; Glycoprotein; Immunoglobulin domain; Membrane; Phosphoprotein; Polymorphism; Receptor; Reference proteome; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 182 AA 
Protein Sequence
MEQGKGLAVL ILAIILLQGT LAQSIKGNHL VKVYDYQEDG SVLLTCDAEA KNITWFKDGK 60
MIGFLTEDKK KWNLGSNAKD PRGMYQCKGS QNKSKPLQVY YRMCQNCIEL NAATISGFLF 120
AEIVSIFVLA VGVYFIAGQD GVRQSRASDK QTLLPNDQLY QPLKDREDDQ YSHLQGNQLR 180
RN 182 
Gene Ontology
 GO:0042105; C:alpha-beta T cell receptor complex; IEA:Compara.
 GO:0005887; C:integral to plasma membrane; NAS:UniProtKB.
 GO:0042101; C:T cell receptor complex; NAS:UniProtKB.
 GO:0030159; F:receptor signaling complex scaffold activity; NAS:UniProtKB.
 GO:0042608; F:T cell receptor binding; NAS:UniProtKB.
 GO:0004888; F:transmembrane signaling receptor activity; IMP:UniProtKB.
 GO:0007163; P:establishment or maintenance of cell polarity; IMP:UniProtKB.
 GO:0038096; P:Fc-gamma receptor signaling pathway involved in phagocytosis; TAS:Reactome.
 GO:0045087; P:innate immune response; TAS:Reactome.
 GO:0006461; P:protein complex assembly; NAS:UniProtKB.
 GO:0015031; P:protein transport; IMP:UniProtKB.
 GO:0070228; P:regulation of lymphocyte apoptotic process; IMP:UniProtKB.
 GO:0042110; P:T cell activation; NAS:UniProtKB.
 GO:0031295; P:T cell costimulation; TAS:Reactome.
 GO:0050852; P:T cell receptor signaling pathway; TAS:Reactome. 
Interpro
 IPR015484; CD3_gsu/dsu.
 IPR013783; Ig-like_fold.
 IPR003598; Ig_sub2.
 IPR003110; Phos_immunorcpt_sig_ITAM. 
Pfam
 PF02189; ITAM 
SMART
 SM00408; IGc2
 SM00077; ITAM 
PROSITE
 PS50835; IG_LIKE
 PS51055; ITAM_1 
PRINTS