CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006573
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 GTP-binding protein YPT52 
Protein Synonyms/Alias
  
Gene Name
 YPT52 
Gene Synonyms/Alias
 YKR014C; YK112 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
151EGGDEEQKVRAISTEubiquitination[1, 2]
Reference
 [1] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Required for transport in the endocytic pathway and for correct sorting of the vacuolar hydrolases suggesting a possible intersection of the endocytic with the vacuolar sorting pathway. 
Sequence Annotation
 NP_BIND 10 17 GTP (By similarity).
 NP_BIND 66 70 GTP (By similarity).
 NP_BIND 111 114 GTP (By similarity).
 MOD_RES 139 139 Phosphoserine.
 MOD_RES 142 142 Phosphoserine.
 LIPID 232 232 S-geranylgeranyl cysteine (By
 LIPID 233 233 S-geranylgeranyl cysteine (By  
Keyword
 Cell membrane; Complete proteome; Direct protein sequencing; Endoplasmic reticulum; GTP-binding; Lipoprotein; Membrane; Nucleotide-binding; Phosphoprotein; Prenylation; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 234 AA 
Protein Sequence
MLQFKLVLLG DSSVGKSSIV HRFVKDTFDE LRESTIGAAF LSQSITIHPN DGNETKDVVI 60
KFEIWDTAGQ ERYKSLAPMY YRNANAALVV YDITQEDSLQ KARNWVDELK NKVGDDDLVI 120
YLLGNKVDLC QETPSTETSP DSNEGGDEEQ KVRAISTEEA KQYAQEQGLL FREVSAKTGE 180
GVKEIFQDIG EKLYDLKKDE ILSKQNRQIG GGNNGQVDIN LQRPSTNDPT SCCS 234 
Gene Ontology
 GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
 GO:0005770; C:late endosome; IMP:SGD.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0003924; F:GTPase activity; IDA:SGD.
 GO:0006897; P:endocytosis; IMP:SGD.
 GO:0006895; P:Golgi to endosome transport; IMP:SGD.
 GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IGI:SGD.
 GO:0036258; P:multivesicular body assembly; IGI:SGD.
 GO:0036010; P:protein localization to endosome; IGI:SGD.
 GO:0006623; P:protein targeting to vacuole; IMP:SGD.
 GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR001806; Small_GTPase.
 IPR003579; Small_GTPase_Rab_type. 
Pfam
 PF00071; Ras 
SMART
 SM00175; RAB 
PROSITE
 PS51419; RAB 
PRINTS
 PR00449; RASTRNSFRMNG.