CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-038889
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Arid1b 
Protein Synonyms/Alias
  
Gene Name
 Arid1b 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
478VPLKADGKEEGVPQPacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1751 AA 
Protein Sequence
SQGSPMDPMV MKRPQLYGMG THPHSQPQQS SPYPGGAYGP PGAQRYPLGM QGRAPGALGG 60
LQYPQQQMPP QYGQQGVSGY CQQGQQPYYN QQPQPSHLPP QAQYLQPQSQ QRYQPQQDMS 120
QEGYGTRAQP PLAPGKSNHE DLNLIQQERP SSLPDLSGSI DDLPTGTEAT LSSAVSASGS 180
TSSQGDQSNP AQSPFSPHAS PHLSSIPGGP SPSPVGSPVG SNQSRSGPIS PASIPGFMAG 240
TQRNPQMSQY GPQQTGPSMS PHPSPGGQMH PGISNFQQSN SSGTYGPQMS QYGPQGNYSR 300
TPTYSGVPSA SYSGPGPGMG INANNQMHGQ GPTQPCGAMP LGRMPSAGMQ SRPFPGNMSS 360
VPPSSPGMSQ QGGPGMGPPM PTVNRKAQEA AAAVMQAAAN SAQSRQGSFP GMNQSGLVAS 420
SSPYSQPMNN NSNLMGTQAQ PYSMTPTMVN SSTASMGLTD MMSPSESKLS VPLKADGKEE 480
GVPQPESKSK DSYSSQGISQ PPTPGNLPVP SPMSPSSASI SSFHGDESDS ISSPGWPKTP 540
SSPKSSSSST TGEKITKVYE LGTEPERKLW VDRYLTFMEE RGSPVSSLPA VGKKPLDLFR 600
LYVCVKEIGG LAQVNKNKKW RELATNLNVG TSSSAASSLK KQYIQYLFAF ECKIERGEEP 660
PPEVFSTGDA KKQPKLQPPS PANSGSLQGP QTPQSTGSSS MAEVPGDLKP PTPASTPHGQ 720
GTPMQSGRSS TVSVHDPFSD VSDSAYPKRN SMTPNAPYQQ GMGMPDMMGR MPYEPNKDPF 780
SGMRKVPGSS EPFMTQGQMP NSSMQDMYNQ SPSGAMSNLG MGQRQQFPYG TSYDRRHEAY 840
GQQYPGQGPP TGQPPYGGHQ PGLYPQQPNY KRHMDGMYGP PAKRHEGDMY NMQYGSQQQE 900
MYNQYGGSYS GPDRRPIQGQ YPYPYNRERM QGPGQMQPHG IPPQMMGGPM QSSSNEGPQQ 960
NMWATRNDMP YPYQNRQGPG GPAQAPPYPG MNRTDDMMVP DQRINHESQW PSHVSQRQPY 1020
MSSSASMQPI TRPPQSSYQT PPSLPNHISR APSPASFPRS LESRMSPSKS PFLPAMKMQK 1080
VMPTVPTSQV TGPPPQPPPI RREITFPPGS VEASQPVLKQ RRKITSKDIV TPEAWRVMMS 1140
LKSGLLAEST WALDTINILL YDDSTVATFN LSQLSGFLEL LVEYFRKCLI DIFGILMEYE 1200
VGDPSQRALD HRTGKKDDSQ SSEDDSGKEE DDAECLEEEE EEEEEEEEEE EEDSKKTESE 1260
GKSSSALAAP DTTADPKETP RQASKFDKLP IKIVKKNNLF VVDRSDRLGR VQEFNSGLLH 1320
WQLGGGDTTE HILTHFESKM EIPPRRRPPA PLSSTGKKKE LAGKGDSEEQ PEKSIIATID 1380
DVLSARPGAL PEDSNPGPQT ESGKFPFGIQ QAKSHRNIRL LEDEPRSRDE TPLCTIAHWQ 1440
DSLAKRCICV SNIVRSLSFV PGNDAEMSKH PGLVLILGKL ILLHHEHPER KRAPQTYEKE 1500
EDEDKGVACS KDEWWWDCLE VLRDNTLVTL ANISGQLDLS AYTESICLPI LDGLLHWMVC 1560
PSAEAQDPFP TVGPNSVLSP QRLVLETLCK LSIQDNNVDL ILATPPFSRQ EKFYATLVRY 1620
VGDRKNPVCR EMSMALLSNL AQGDTLAARA IAVQKGSIGN LIGFLEDGVT MAQYQQSQHT 1680
LMHMQPPPLE PPSVDMMCRA AKALLAMARV DENRSEFLLH EGRLLDISIS AVLNSLVASV 1740
ICDVLFQIGQ L 1751 
Gene Ontology
 GO:0016514; C:SWI/SNF complex; IEA:Compara.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:RGD. 
Interpro
 IPR001606; ARID/BRIGHT_DNA-bd.
 IPR021906; DUF3518. 
Pfam
 PF01388; ARID
 PF12031; DUF3518 
SMART
 SM00501; BRIGHT 
PROSITE
 PS51011; ARID 
PRINTS