CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026867
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Scaf4 
Protein Synonyms/Alias
 Splicing factor, arginine/serine-rich 15 
Gene Name
 Scaf4 
Gene Synonyms/Alias
 Sfrs15; Srsf15 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
119RVLNLWQKNGVFKIEubiquitination[1]
244PTQPPEQKTAFDKKLubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1209 AA 
Protein Sequence
MDAVNAFNQE LFSLMDMKPP ISRAKMILIT KAAIKAIKLY KHVVQIVEKF IKKCKPEYKV 60
PGLYVIDSIV RQSRHQFGTD KDVFGPRFSK NITATFQYLY LCPSEDKSKI VRVLNLWQKN 120
GVFKIEIIQP LLDMAAGTSN AAPVAENVTN NEGSPPPPVK ISSELAQAPT NSMPTVAQLP 180
SSDAFAAVAQ LFQTTQGQQL QQILQTFQQP PQPQSPALDS AVMAQVQAIT AQLKTAPTQP 240
PEQKTAFDKK LLDRFDYDDE PEAVEDSKKE DAAAISTAAL ATAAPPAPTA ATPAVATAVP 300
VPSATSPPPP QTPFGYPGDG VQQPAYTQHQ SMDQFQPRMM PIQQDTMHHQ VPLPPNGQMP 360
GFGLLSAPPP FPPMPQPGMP QPGMAQPGLA QPGMAQPTMP QPGMPQPGMP QPGMAQPGLA 420
QPGMAQPGMP QPAMPQPAMP QPGMAQPGVS PAPPVQPTFQ STFQPQNEPH SQKPHQQEME 480
VEQPCVTEVK RHVPESRKSR SRSASRSPKR RRSRSGSRSR RSRHRRSRSR SRDRRRHSPR 540
SRSQERRDRE KERERRQKGL PQIKSETASV CSTTLWVGQL DKRTTQQDVA SLLEEFGPIE 600
SINMIPPRGC AYIVMVHRQD AYRALQKLSR GNYKVNQKSI KIAWALNKGI KADYKQYWDV 660
ELGVTYIPWD KVKAEELESF CEGGMLDSDT LNPDWKGIPK KPDNEVAQNG GAETSHTEPV 720
SPIPKPVPVP VPPIPVPAPI TVPPPQVPPH QPGPPVVGAL QPPAFTPPLG MPPPGFGPGV 780
PPPPPPPPFL RPGFNPMHLP PGFLPPGPPP PITPPVSIPP PHTPPISIPN STIAGINEDT 840
TKDLSIGNPI PTVVSGARGN AESGDSAKMY GSAGPPAAPT SLPTPPVTQP VSLLGTQGVA 900
PGPVIGLQAP STGLLGARPG LIPLQRPPGM PPPHLQRFPM MPPRPMPPHM MHRGPPPGPG 960
GFAMPPPHGM KGPFPPHGPF VRPGGMPGLG GPGPGPGASE DRDGRQQQPQ QQPPPQQQQQ 1020
QQQPQQQPPQ QSPSQQPAPA QQQPPQFRND SRQQFNSGRD QERFGRRSFG SRVENDRERY 1080
GSRNDDRDNS NRERREWGRR SPDRDRHRDL EERSRRSSGH RDRDRDSRDR ESRREKEENR 1140
KEKHEVADRA GGNKAVEPPL SQVGTIDTVS ELNKGEAMAT VVKPEESPAE VTSPVGPEKD 1200
PGSAAEPPR 1209 
Gene Ontology
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0000166; F:nucleotide binding; IEA:InterPro. 
Interpro
 IPR006569; CID_dom.
 IPR008942; ENTH_VHS.
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR006903; RNA_pol_II-bd.
 IPR000504; RRM_dom. 
Pfam
 PF04818; CTD_bind
 PF00076; RRM_1 
SMART
 SM00582; RPR
 SM00360; RRM 
PROSITE
 PS51391; CID
 PS50102; RRM 
PRINTS