CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009568
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ras-related protein Rab-1A 
Protein Synonyms/Alias
 YPT1-related protein 
Gene Name
 RAB1A 
Gene Synonyms/Alias
 RAB1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
55YASENVNKLLVGNKCubiquitination[1]
123ATAGGAEKSNVKIQSubiquitination[1]
127GAEKSNVKIQSTPVKubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Probably required for transit of protein from the ER through Golgi compartment. Binds GTP and GDP and possesses intrinsic GTPase activity. 
Sequence Annotation
 NP_BIND 18 26 GTP.
 NP_BIND 66 70 GTP (By similarity).
 NP_BIND 124 127 GTP.
 NP_BIND 154 156 GTP.
 MOTIF 40 48 Effector region (By similarity).
 MOD_RES 2 2 N-acetylserine.
 MOD_RES 79 79 O-(2-cholinephosphoryl)serine; by
 MOD_RES 194 194 Phosphoserine; by CDK1 (Probable).
 LIPID 204 204 S-geranylgeranyl cysteine.
 LIPID 205 205 S-geranylgeranyl cysteine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Direct protein sequencing; Endoplasmic reticulum; ER-Golgi transport; Golgi apparatus; GTP-binding; Lipoprotein; Nucleotide-binding; Phosphoprotein; Prenylation; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 205 AA 
Protein Sequence
MSSMNPEYDY LFKLLLIGDS GVGKSCLLLR FAESFNNVKQ WLQEIDRYAS ENVNKLLVGN 60
KCDLTTKKVV DYTTAKEFAD SLGIPFLETS AKNATNVEQS FMTMAAEIKK RMGPGATAGG 120
AEKSNVKIQS TPVKQSGGGC C 141 
Gene Ontology
 GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
 GO:0000139; C:Golgi membrane; TAS:Reactome.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0003924; F:GTPase activity; TAS:ProtInc.
 GO:0000278; P:mitotic cell cycle; TAS:Reactome.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
 GO:0016192; P:vesicle-mediated transport; TAS:ProtInc. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR001806; Small_GTPase.
 IPR003579; Small_GTPase_Rab_type. 
Pfam
 PF00071; Ras 
SMART
 SM00175; RAB 
PROSITE
 PS51419; RAB 
PRINTS
 PR00449; RASTRNSFRMNG.