CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018139
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cystathionine gamma-lyase 
Protein Synonyms/Alias
 Cysteine-protein sulfhydrase; Gamma-cystathionase 
Gene Name
 Cth 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
47ISLATTFKQDFPGQSubiquitination[1]
72PTRNCLEKAVAALDGacetylation[2, 3]
72PTRNCLEKAVAALDGubiquitination[1]
138ISFVDCSKTKLLEAAacetylation[4]
138ISFVDCSKTKLLEAAsuccinylation[4]
140FVDCSKTKLLEAAITacetylation[2, 5, 6]
140FVDCSKTKLLEAAITubiquitination[1]
151AAITPQTKLVWIETPubiquitination[1]
259YLCCRGLKTLQVRMEubiquitination[1]
270VRMEKHFKNGMAVARubiquitination[1]
303HPQHELAKRQCSGCPubiquitination[1]
325KGALQHAKAFLKNLKacetylation[4, 5]
325KGALQHAKAFLKNLKsuccinylation[4]
325KGALQHAKAFLKNLKubiquitination[1]
329QHAKAFLKNLKLFTLacetylation[5]
329QHAKAFLKNLKLFTLubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [3] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [4] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [5] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [6] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654
Functional Description
 Catalyzes the last step in the trans-sulfuration pathway from methionine to cysteine. Has broad substrate specificity. Converts cystathionine to cysteine, ammonia and 2-oxobutanoate. Converts two cysteine molecules to lanthionine and hydrogen sulfide. Can also accept homocysteine as substrate. Specificity depends on the levels of the endogenous substrates. Generates the endogenous signaling molecule hydrogen sulfide (H2S), and so contributes to the regulation of blood pressure. Acts as a cysteine-protein sulfhydrase by mediating sulfhydration of target proteins: sulfhydration consists of converting -SH groups into -SSH on specific cysteine residues of target proteins such as GAPDH, PTPN1 and NF-kappa-B subunit RELA, thereby regulating their function. 
Sequence Annotation
 BINDING 61 61 Substrate (By similarity).
 BINDING 113 113 Substrate (By similarity).
 BINDING 118 118 Substrate (By similarity).
 BINDING 338 338 Substrate (By similarity).
 MOD_RES 211 211 N6-(pyridoxal phosphate)lysine (By
 MOD_RES 376 376 Phosphoserine.  
Keyword
 Amino-acid biosynthesis; Calmodulin-binding; Complete proteome; Cysteine biosynthesis; Cytoplasm; Lyase; Phosphoprotein; Pyridoxal phosphate; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 398 AA 
Protein Sequence
MQKDASLSGF LPSFQHFATQ AIHVGQEPEQ WNSRAVVLPI SLATTFKQDF PGQSSGFEYS 60
RSGNPTRNCL EKAVAALDGA KHSLAFASGL AATITITHLL KAGDEIICMD EVYGGTNRYF 120
RRVASEFGLK ISFVDCSKTK LLEAAITPQT KLVWIETPTN PTLKLADIGA CAQIVHKRGD 180
IILVVDNTFM SAYFQRPLAL GADICMCSAT KYMNGHSDVV MGLVSVNSDD LNSRLRFLQN 240
SLGAVPSPFD CYLCCRGLKT LQVRMEKHFK NGMAVARFLE TNPRVEKVVY PGLPSHPQHE 300
LAKRQCSGCP GMVSFYIKGA LQHAKAFLKN LKLFTLAESL GGYESLAELP AIMTHASVPE 360
KDRATLGIND TLIRLSVGLE DEQDLLEDLD RALKAAHP 398 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0004123; F:cystathionine gamma-lyase activity; ISS:UniProtKB.
 GO:0080146; F:L-cysteine desulfhydrase activity; IEA:EC.
 GO:0044540; F:L-cystine L-cysteine-lyase (deaminating); IDA:UniProtKB.
 GO:0030170; F:pyridoxal phosphate binding; ISS:UniProtKB.
 GO:0019344; P:cysteine biosynthetic process; ISS:UniProtKB.
 GO:0070814; P:hydrogen sulfide biosynthetic process; ISS:UniProtKB.
 GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.
 GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; IMP:UniProtKB.
 GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; IMP:UniProtKB.
 GO:0051289; P:protein homotetramerization; IEA:Compara.
 GO:0044524; P:protein sulfhydration; IDA:UniProtKB.
 GO:0018272; P:protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine; ISS:UniProtKB. 
Interpro
 IPR000277; Cys/Met-Metab_PyrdxlP-dep_enz.
 IPR015424; PyrdxlP-dep_Trfase.
 IPR015421; PyrdxlP-dep_Trfase_major_sub1.
 IPR015422; PyrdxlP-dep_Trfase_major_sub2. 
Pfam
 PF01053; Cys_Met_Meta_PP 
SMART
  
PROSITE
 PS00868; CYS_MET_METAB_PP 
PRINTS