CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002512
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ras-related protein SEC4 
Protein Synonyms/Alias
 Suppressor of RHO3 protein 6 
Gene Name
 SEC4 
Gene Synonyms/Alias
 SRO6; YFL005W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
70DINGKKVKLQLWDTAacetylation[1]
152DQGEALAKELGIPFIubiquitination[2]
183LAKLIQEKIDSNKLVacetylation[1]
183LAKLIQEKIDSNKLVubiquitination[2]
196LVGVGNGKEGNISINubiquitination[2]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Involved in exocytosis. Maybe by regulating the binding and fusion of secretory vesicles with the cell surface. The GTP- bound form of SEC4 may interact with an effector, thereby stimulating its activity and leading to exocytotic fusion. SEC4 may be an upstream activator of the 19.5S SEC8/SEC15 particle. SEC4 probably interacts directly with SEC8; it could serve as the attachment site for the SEC8/SEC15 particle. 
Sequence Annotation
 NP_BIND 27 34 GTP.
 NP_BIND 75 79 GTP.
 NP_BIND 133 136 GTP (By similarity).
 MOTIF 49 57 Effector region (Probable).
 MOD_RES 201 201 Phosphoserine.
 MOD_RES 204 204 Phosphoserine.
 LIPID 214 214 S-geranylgeranyl cysteine (By
 LIPID 215 215 S-geranylgeranyl cysteine (By  
Keyword
 3D-structure; Cell membrane; Complete proteome; Cytoplasm; Cytoplasmic vesicle; Exocytosis; GTP-binding; Lipoprotein; Membrane; Nucleotide-binding; Phosphoprotein; Prenylation; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 215 AA 
Protein Sequence
MSGLRTVSAS SGNGKSYDSI MKILLIGDSG VGKSCLLVRF VEDKFNPSFI TTIGIDFKIK 60
TVDINGKKVK LQLWDTAGQE RFRTITTAYY RGAMGIILVY DVTDERTFTN IKQWFKTVNE 120
HANDEAQLLL VGNKSDMETR VVTADQGEAL AKELGIPFIE SSAKNDDNVN EIFFTLAKLI 180
QEKIDSNKLV GVGNGKEGNI SINSGSGNSS KSNCC 215 
Gene Ontology
 GO:0030478; C:actin cap; TAS:SGD.
 GO:0000131; C:incipient cellular bud site; IDA:SGD.
 GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
 GO:0005886; C:plasma membrane; IDA:SGD.
 GO:0030133; C:transport vesicle; TAS:SGD.
 GO:0030658; C:transport vesicle membrane; IEA:UniProtKB-SubCell.
 GO:0005525; F:GTP binding; IDA:SGD.
 GO:0003924; F:GTPase activity; IDA:SGD.
 GO:0031321; P:ascospore-type prospore assembly; IMP:SGD.
 GO:0006914; P:autophagy; IMP:SGD.
 GO:0007121; P:bipolar cellular bud site selection; TAS:SGD.
 GO:0006887; P:exocytosis; IDA:SGD.
 GO:0006893; P:Golgi to plasma membrane transport; IMP:SGD.
 GO:0007107; P:membrane addition at site of cytokinesis; IMP:SGD.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:0007264; P:small GTPase mediated signal transduction; TAS:SGD.
 GO:0006906; P:vesicle fusion; IMP:SGD. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR001806; Small_GTPase.
 IPR003579; Small_GTPase_Rab_type. 
Pfam
 PF00071; Ras 
SMART
 SM00175; RAB 
PROSITE
 PS51419; RAB 
PRINTS
 PR00449; RASTRNSFRMNG.