CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016708
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 C-type lectin domain family 2 member H 
Protein Synonyms/Alias
 C-type lectin-related protein F; Clr-f 
Gene Name
 Clec2h 
Gene Synonyms/Alias
 Clrf 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
5***MNAAKVETSSMGubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Lectin-type cell surface receptor (By similarity). 
Sequence Annotation
 DOMAIN 97 201 C-type lectin.
 CARBOHYD 110 110 N-linked (GlcNAc...) (Potential).
 DISULFID 90 101 By similarity.
 DISULFID 118 200 By similarity.  
Keyword
 Cell membrane; Complete proteome; Disulfide bond; Glycoprotein; Lectin; Membrane; Receptor; Reference proteome; Signal-anchor; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 218 AA 
Protein Sequence
MNAAKVETSS MGMLQRADLT AADCLQEGEM GKKIQGKCFR IISTVSPVKL YCCYGVIMVL 60
TVAVIALSVA LSVRNKIPAM EDREPCYTAC PSGWIGFGSK CFYFSEDMGN WTFSQSSCVA 120
SNSHLALFHS LEELNFLKRY KGTSDHWIGL HRASTQHPWI WTDNTEYSNL VLTRGGGECG 180
FLSDNGISSG RSYTHRKWIC SKFVSSCKSR VGSVPRHV 218 
Gene Ontology
 GO:0005887; C:integral to plasma membrane; TAS:MGI.
 GO:0030246; F:carbohydrate binding; ISS:MGI.
 GO:0004888; F:transmembrane signaling receptor activity; ISS:MGI.
 GO:0006968; P:cellular defense response; TAS:MGI. 
Interpro
 IPR001304; C-type_lectin.
 IPR016186; C-type_lectin-like.
 IPR016187; C-type_lectin_fold. 
Pfam
 PF00059; Lectin_C 
SMART
 SM00034; CLECT 
PROSITE
 PS00615; C_TYPE_LECTIN_1
 PS50041; C_TYPE_LECTIN_2 
PRINTS