UniProt Accession

 D3ZVH2_RAT; D3ZVH2 

Genbank Protein ID

 AABR06023868 

Genbank Nucleotide ID

  

Protein Name

 Protein RGD1560831 

Protein Synonyms/Alias

  

Gene Name

 RGD1560831 

Gene Synonyms/Alias

  

Created Date

 July 27, 2013 

Organism

 Rattus norvegicus (Rat) 

NCBI Taxa ID

 10116 

Lysine Modification

Position	Peptide	Type	References
10	VQISKKRKFVADGIF	acetylation	[1]
62	TQNVLGEKGRRIREL	acetylation	[1]
108	QAESLCYKLLGGLAV	acetylation	[1]
197	LPWDPSGKIGPKKPL	acetylation	[1]
214	HVSIVEPKDEILPTT	acetylation	[1]
214	HVSIVEPKDEILPTT	ubiquitination	[2]

Reference

 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405]
 [2] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113] 

Functional Description

  

Sequence Annotation

  

Keyword

 Complete proteome; Reference proteome; Ribonucleoprotein; Ribosomal protein. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 243 AA 

Protein Sequence

Gene Ontology

 GO:0015935; C:small ribosomal subunit; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:InterPro.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:InterPro. 

Interpro

 IPR004087; KH_dom.
 IPR015946; KH_dom-like_a/b.
 IPR004044; KH_dom_type_2.
 IPR009019; KH_prok-type.
 IPR001351; Ribosomal_S3_C.
 IPR018280; Ribosomal_S3_CS.
 IPR005703; Ribosomal_S3_euk/arc. 

Pfam

 PF07650; KH_2
 PF00189; Ribosomal_S3_C 

SMART

 SM00322; KH 

PROSITE

 PS50823; KH_TYPE_2
 PS00548; RIBOSOMAL_S3 

PRINTS