CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-028780
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Pre-mRNA-processing factor 40 homolog A 
Protein Synonyms/Alias
  
Gene Name
 Prpf40a 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
154EYKSDSGKPYYYNSQacetylation[1, 2]
154EYKSDSGKPYYYNSQubiquitination[3]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [3] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 409 AA 
Protein Sequence
MRPGTGAERG GLMMGHPGMH YAPMGMHPMG QRANMPPVPH GMMPQMMPPM GGPPMGQMPG 60
MMSSVMSGMM MSHMSQASMQ PALPPGVNSM DVAAGAASGA KSMWTEHKSP DGRTYYYNTE 120
TKQSTWEKPD DLKTPAEQLL SKCPWKEYKS DSGKPYYYNS QTKESRWAKP KELEDLEGYQ 180
NTIVAGGLIT KSNLHAMIKA EESSKQEECT TASTAPVPTT EIPTTMSTMA AAEAAAAVVA 240
AAAAAAAAAN ANTSTTPTNT VGSVPVAPEP EVTSIVATAV DNENTVTVST EEQAQLANTT 300
AIQDLSGDIS SNTGEEPAKQ ETVSDFTPKK EEEESQPAKK TYTWNTKEEA KQAFKELLKE 360
KRVPSNASWE QAMKMIINDP RYSALAKLSE KKQAFNAYKV QTEKEEKEE 409 
Gene Ontology
 GO:0070064; F:proline-rich region binding; IDA:MGI. 
Interpro
 IPR002713; FF_domain.
 IPR001202; WW_dom. 
Pfam
 PF01846; FF
 PF00397; WW 
SMART
 SM00441; FF
 SM00456; WW 
PROSITE
 PS01159; WW_DOMAIN_1
 PS50020; WW_DOMAIN_2 
PRINTS