CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002226
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 ADP/ATP translocase 2 
Protein Synonyms/Alias
 ADP,ATP carrier protein 2; ADP,ATP carrier protein, fibroblast isoform; Adenine nucleotide translocator 2; ANT 2; Solute carrier family 25 member 5; ADP/ATP translocase 2, N-terminally processed 
Gene Name
 SLC25A5 
Gene Synonyms/Alias
 ANT2 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
10DAAVSFAKDFLAGGVacetylation[1]
10DAAVSFAKDFLAGGVubiquitination[2, 3]
23GVAAAISKTAVAPIEacetylation[4, 5, 6, 7]
23GVAAAISKTAVAPIEmalonylation[8]
23GVAAAISKTAVAPIEubiquitination[2, 3, 7, 9, 10, 11]
33VAPIERVKLLLQVQHubiquitination[2, 3]
43LQVQHASKQITADKQubiquitination[2, 3, 7, 9]
49SKQITADKQYKGIIDubiquitination[7]
52ITADKQYKGIIDCVVmethylation[12, 13, 14]
52ITADKQYKGIIDCVVubiquitination[7]
63DCVVRIPKEQGVLSFubiquitination[2, 3]
92QALNFAFKDKYKQIFacetylation[4, 15]
92QALNFAFKDKYKQIFmalonylation[8]
92QALNFAFKDKYKQIFubiquitination[2, 3, 9]
94LNFAFKDKYKQIFLGubiquitination[3, 9]
96FAFKDKYKQIFLGGVacetylation[4, 5, 6]
96FAFKDKYKQIFLGGVmalonylation[8]
96FAFKDKYKQIFLGGVubiquitination[2, 3, 9]
105IFLGGVDKRTQFWLYacetylation[4, 5, 7]
105IFLGGVDKRTQFWLYubiquitination[2, 3, 7, 9]
147RLAADVGKAGAEREFmalonylation[8]
147RLAADVGKAGAEREFubiquitination[2, 3, 7, 9, 10, 11, 16, 17]
163GLGDCLVKIYKSDGIacetylation[4, 5, 6, 7]
163GLGDCLVKIYKSDGIubiquitination[2, 3, 7]
166DCLVKIYKSDGIKGLacetylation[6]
166DCLVKIYKSDGIKGLubiquitination[2, 3, 7, 9]
199FGIYDTAKGMLPDPKacetylation[4]
199FGIYDTAKGMLPDPKubiquitination[2, 9]
245MMMQSGRKGTDIMYTubiquitination[2, 3, 7]
268IARDEGGKAFFKGAWacetylation[4, 6]
268IARDEGGKAFFKGAWubiquitination[2, 3, 7, 9]
272EGGKAFFKGAWSNVLacetylation[4, 5, 6, 7, 15]
272EGGKAFFKGAWSNVLubiquitination[2, 3, 7, 9, 11, 16, 18]
295LVLYDEIKKYT****ubiquitination[16]
Reference
 [1] Spermidine and resveratrol induce autophagy by distinct pathways converging on the acetylproteome.
 Morselli E, Mariño G, Bennetzen MV, Eisenberg T, Megalou E, Schroeder S, Cabrera S, Bénit P, Rustin P, Criollo A, Kepp O, Galluzzi L, Shen S, Malik SA, Maiuri MC, Horio Y, López-Otín C, Andersen JS, Tavernarakis N, Madeo F, Kroemer G.
 J Cell Biol. 2011 Feb 21;192(4):615-29. [PMID: 21339330]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [5] Proteomic investigations reveal a role for RNA processing factor THRAP3 in the DNA damage response.
 Beli P, Lukashchuk N, Wagner SA, Weinert BT, Olsen JV, Baskcomb L, Mann M, Jackson SP, Choudhary C.
 Mol Cell. 2012 Apr 27;46(2):212-25. [PMID: 22424773]
 [6] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [7] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [8] The first identification of lysine malonylation substrates and its regulatory enzyme.
 Peng C, Lu Z, Xie Z, Cheng Z, Chen Y, Tan M, Luo H, Zhang Y, He W, Yang K, Zwaans BM, Tishkoff D, Ho L, Lombard D, He TC, Dai J, Verdin E, Ye Y, Zhao Y.
 Mol Cell Proteomics. 2011 Dec;10(12):M111.012658. [PMID: 21908771]
 [9] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [10] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [11] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [12] Update on activities at the Universal Protein Resource (UniProt) in 2013.
 e="String">UniProt Consortium.
 Nucleic Acids Res. 2013 Jan;41(Database issue):D43-7. [PMID: 23161681]
 [13] Large-scale global identification of protein lysine methylation in vivo.
 Cao XJ, Arnaudo AM, Garcia BA.
 Epigenetics. 2013 May 1;8(5):477-85. [PMID: 23644510]
 [14] Mass spectrometry-based identification and characterisation of lysine and arginine methylation in the human proteome.
 Bremang M, Cuomo A, Agresta AM, Stugiewicz M, Spadotto V, Bonaldi T.
 Mol Biosyst. 2013 Jul 30;9(9):2231-47. [PMID: 23748837]
 [15] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786]
 [16] A data set of human endogenous protein ubiquitination sites.
 Shi Y, Chan DW, Jung SY, Malovannaya A, Wang Y, Qin J.
 Mol Cell Proteomics. 2011 May;10(5):M110.002089. [PMID: 20972266]
 [17] Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin.
 Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI.
 J Proteome Res. 2012 Feb 3;11(2):796-807. [PMID: 22053931]
 [18] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094
Functional Description
 Catalyzes the exchange of cytoplasmic ADP with mitochondrial ATP across the mitochondrial inner membrane. As part of the mitotic spindle-associated MMXD complex it may play a role in chromosome segregation. 
Sequence Annotation
 REPEAT 6 98 Solcar 1.
 REPEAT 111 201 Solcar 2.
 REPEAT 212 297 Solcar 3.
 MOTIF 235 240 Substrate recognition (By similarity).
 BINDING 80 80 Nucleotide (By similarity).
 MOD_RES 1 1 N-acetylmethionine.
 MOD_RES 2 2 N-acetylthreonine; in ADP/ATP translocase
 MOD_RES 23 23 N6-malonyllysine.
 MOD_RES 42 42 Phosphoserine (By similarity).
 MOD_RES 52 52 N6,N6-dimethyllysine; alternate.
 MOD_RES 52 52 N6-methyllysine; alternate.
 MOD_RES 92 92 N6-malonyllysine.
 MOD_RES 96 96 N6-malonyllysine.
 MOD_RES 105 105 N6-acetyllysine.
 MOD_RES 147 147 N6-malonyllysine.
 MOD_RES 163 163 N6-acetyllysine.
 MOD_RES 166 166 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Chromosome partition; Complete proteome; Direct protein sequencing; Host-virus interaction; Membrane; Methylation; Mitochondrion; Mitochondrion inner membrane; Phosphoprotein; Polymorphism; Reference proteome; Repeat; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 298 AA 
Protein Sequence
MTDAAVSFAK DFLAGGVAAA ISKTAVAPIE RVKLLLQVQH ASKQITADKQ YKGIIDCVVR 60
IPKEQGVLSF WRGNLANVIR YFPTQALNFA FKDKYKQIFL GGVDKRTQFW LYFAGNLASG 120
GAAGATSLCF VYPLDFARTR LAADVGKAGA EREFRGLGDC LVKIYKSDGI KGLYQGFNVS 180
VQGIIIYRAA YFGIYDTAKG MLPDPKNTHI VISWMIAQTV TAVAGLTSYP FDTVRRRMMM 240
QSGRKGTDIM YTGTLDCWRK IARDEGGKAF FKGAWSNVLR GMGGAFVLVL YDEIKKYT 298 
Gene Ontology
 GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
 GO:0005743; C:mitochondrial inner membrane; TAS:Reactome.
 GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.
 GO:0071817; C:MMXD complex; IDA:UniProtKB.
 GO:0015207; F:adenine transmembrane transporter activity; TAS:ProtInc.
 GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.
 GO:0006112; P:energy reserve metabolic process; TAS:Reactome.
 GO:1901029; P:negative regulation of mitochondrial outer membrane permeabilization; IMP:UniProtKB.
 GO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB.
 GO:0050796; P:regulation of insulin secretion; TAS:Reactome.
 GO:0044281; P:small molecule metabolic process; TAS:Reactome.
 GO:0016032; P:viral reproduction; TAS:Reactome.
 GO:0019048; P:virus-host interaction; IEA:UniProtKB-KW. 
Interpro
 IPR002113; Aden_trnslctor.
 IPR002067; Mit_carrier.
 IPR018108; Mitochondrial_sb/sol_carrier.
 IPR023395; Mt_carrier_dom. 
Pfam
 PF00153; Mito_carr 
SMART
  
PROSITE
 PS50920; SOLCAR 
PRINTS
 PR00927; ADPTRNSLCASE.
 PR00926; MITOCARRIER.