CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011431
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DNA repair protein RAD51 homolog 1 
Protein Synonyms/Alias
 HsRAD51; hRAD51; RAD51 homolog A 
Gene Name
 RAD51 
Gene Synonyms/Alias
 RAD51A; RECA 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
58AVAYAPKKELINIKGubiquitination[1]
64KKELINIKGISEAKAubiquitination[1]
107IQITTGSKELDKLLQubiquitination[2]
156DRGGGEGKAMYIDTEubiquitination[2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Participates in a common DNA damage response pathway associated with the activation of homologous recombination and double-strand break repair. Binds to single and double stranded DNA and exhibits DNA-dependent ATPase activity. Underwinds duplex DNA and forms helical nucleoprotein filaments. Plays a role in regulating mitochondrial DNA copy number under conditions of oxidative stress in the presence of RAD51C and XRCC3. 
Sequence Annotation
 DOMAIN 48 77 HhH.
 NP_BIND 127 134 ATP (By similarity).
 REGION 184 257 Interaction with PALB2.
 MOD_RES 54 54 Phosphotyrosine; by ABL1.
 MOD_RES 309 309 Phosphothreonine; by CHEK1.  
Keyword
 3D-structure; Alternative splicing; ATP-binding; Complete proteome; Cytoplasm; Disease mutation; DNA damage; DNA recombination; DNA repair; DNA-binding; Mitochondrion; Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 339 AA 
Protein Sequence
MAMQMQLEAN ADTSVEEESF GPQPISRLEQ CGINANDVKK LEEAGFHTVE AVAYAPKKEL 60
INIKGISEAK ADKILAEAAK LVPMGFTTAT EFHQRRSEII QITTGSKELD KLLQGGIETG 120
SITEMFGEFR TGKTQICHTL AVTCQLPIDR GGGEGKAMYI DTEGTFRPER LLAVAERYGL 180
SGSDVLDNVA YARAFNTDHQ TQLLYQASAM MVESRYALLI VDSATALYRT DYSGRGELSA 240
RQMHLARFLR MLLRLADEFG VAVVITNQVV AQVDGAAMFA ADPKKPIGGN IIAHASTTRL 300
YLRKGRGETR ICKIYDSPCL PEAEAMFAIN ADGVGDAKD 339 
Gene Ontology
 GO:0000794; C:condensed nuclear chromosome; ISS:UniProtKB.
 GO:0000800; C:lateral element; IEA:Compara.
 GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IDA:UniProtKB.
 GO:0005634; C:nucleus; IDA:UniProtKB.
 GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
 GO:0016605; C:PML body; IDA:UniProtKB.
 GO:0005524; F:ATP binding; IDA:MGI.
 GO:0003684; F:damaged DNA binding; IEA:InterPro.
 GO:0003690; F:double-stranded DNA binding; IDA:UniProtKB.
 GO:0003697; F:single-stranded DNA binding; IDA:UniProtKB.
 GO:0043142; F:single-stranded DNA-dependent ATPase activity; IDA:UniProtKB.
 GO:0000730; P:DNA recombinase assembly; TAS:Reactome.
 GO:0006268; P:DNA unwinding involved in replication; IDA:UniProtKB.
 GO:0006312; P:mitotic recombination; TAS:ProtInc.
 GO:0051106; P:positive regulation of DNA ligation; IDA:UniProtKB.
 GO:0051260; P:protein homooligomerization; IPI:UniProtKB.
 GO:0007131; P:reciprocal meiotic recombination; TAS:ProtInc. 
Interpro
 IPR003593; AAA+_ATPase.
 IPR011941; DNA_recomb/repair_Rad51.
 IPR013632; DNA_recomb/repair_Rad51_C.
 IPR016467; DNA_recomb/repair_RecA-like.
 IPR020588; DNA_recomb_RecA/RadB_ATP-bd.
 IPR010995; DNA_repair_Rad51/TF_NusA_a-hlx.
 IPR003583; Hlx-hairpin-Hlx_DNA-bd_motif.
 IPR027417; P-loop_NTPase.
 IPR020587; RecA_monomer-monomer_interface. 
Pfam
 PF08423; Rad51 
SMART
 SM00382; AAA
 SM00278; HhH1 
PROSITE
 PS50162; RECA_2
 PS50163; RECA_3 
PRINTS